RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A TY1A-JR1P0CX74 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-LR3P0CX75 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-ML2P0CX76 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A RPL34BP40525 121 aaKnown RBP2.45□□□□□ -2.02
TFB5YDR079C-A STU2P46675 888 aa2.45□□□□□ -2.02
TFB5YDR079C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02 RIP-Chip
TFB5YDR079C-A YLR257WQ06146 321 aaKnown RBP2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-GR1Q12085 440 aa2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP2.45□□□□□ -2.02
TFB5YDR079C-A TY1A-OLQ92392 440 aaKnown RBP2.45□□□□□ -2.02
TFB5YDR079C-A SMC1P32908 1225 aa2.44□□□□□ -2.02
TFB5YDR079C-A YER158CP40095 573 aa2.44□□□□□ -2.02
TFB5YDR079C-A TMT1P32643 299 aa2.43□□□□□ -2.02
TFB5YDR079C-A ECM23Q02710 187 aa2.43□□□□□ -2.02
TFB5YDR079C-A HRK1Q08732 759 aaKnown RBP2.43□□□□□ -2.02
TFB5YDR079C-A GPB1Q08886 897 aa2.43□□□□□ -2.02
TFB5YDR079C-A RPB10P22139 70 aa2.42□□□□□ -2.02
TFB5YDR079C-A RET1P22276 1149 aaKnown RBP2.42□□□□□ -2.02
TFB5YDR079C-A DUR3P33413 735 aa2.42□□□□□ -2.02
TFB5YDR079C-A UBX7P38349 436 aa2.42□□□□□ -2.02
TFB5YDR079C-A NBA1Q08229 501 aaKnown RBP2.42□□□□□ -2.02
TFB5YDR079C-A MCM5P29496 775 aaKnown RBP2.41□□□□□ -2.02
TFB5YDR079C-A YAP6Q03935 383 aa2.41□□□□□ -2.02
TFB5YDR079C-A YLR224WQ05947 369 aa2.41□□□□□ -2.02
TFB5YDR079C-A PUN1Q06991 263 aa2.41□□□□□ -2.02
TFB5YDR079C-A TGL4P36165 910 aa2.4□□□□□ -2.03
TFB5YDR079C-A VPS62P53285 467 aa2.4□□□□□ -2.03
TFB5YDR079C-A TMN2Q04562 672 aa2.4□□□□□ -2.03
TFB5YDR079C-A HOF1Q05080 669 aa2.4□□□□□ -2.03
TFB5YDR079C-A GAL10P04397 699 aa2.39□□□□□ -2.03
TFB5YDR079C-A YAR028WP39548 234 aa2.39□□□□□ -2.03
TFB5YDR079C-A SEC26P41810 973 aaKnown RBP2.39□□□□□ -2.03
TFB5YDR079C-A YJL045WP47052 634 aa2.39□□□□□ -2.03
TFB5YDR079C-A RSA3Q05942 220 aaKnown RBP2.39□□□□□ -2.03
TFB5YDR079C-A MDM10P18409 493 aa2.38□□□□□ -2.03
TFB5YDR079C-A SRM1P21827 482 aa2.38□□□□□ -2.03
TFB5YDR079C-A PUF6Q04373 656 aaKnown RBP2.38□□□□□ -2.03
TFB5YDR079C-A IRC10Q08118 586 aa2.38□□□□□ -2.03
TFB5YDR079C-A HRR25P29295 494 aaKnown RBP2.37□□□□□ -2.03
TFB5YDR079C-A SAP155P43612 1002 aa2.37□□□□□ -2.03
TFB5YDR079C-A YSC84P32793 468 aa2.36□□□□□ -2.03
TFB5YDR079C-A SLS1P42900 643 aa2.36□□□□□ -2.03
TFB5YDR079C-A PBP1P53297 722 aaKnown RBP2.36□□□□□ -2.03
TFB5YDR079C-A CMP2P14747 604 aa2.35□□□□□ -2.03
TFB5YDR079C-A PEX2P32800 271 aa2.35□□□□□ -2.03
TFB5YDR079C-A SCS3P53012 380 aa2.35□□□□□ -2.03
TFB5YDR079C-A RCL1Q08096 367 aaPredicted RBP2.35□□□□□ -2.03
TFB5YDR079C-A AIM39Q08223 395 aa2.35□□□□□ -2.03
TFB5YDR079C-A ECM2P38241 364 aaKnown RBP2.34□□□□□ -2.03
TFB5YDR079C-A HSE1P38753 452 aa2.34□□□□□ -2.03
TFB5YDR079C-A NEM1P38757 446 aa2.34□□□□□ -2.03
TFB5YDR079C-A SEC5P89102 971 aa2.34□□□□□ -2.03
TFB5YDR079C-A MCH5Q08777 521 aa2.34□□□□□ -2.03
TFB5YDR079C-A HMI1Q12039 706 aa2.34□□□□□ -2.03
TFB5YDR079C-A EMC1P25574 760 aa2.33□□□□□ -2.04
TFB5YDR079C-A EXO5P38289 585 aa2.33□□□□□ -2.04
TFB5YDR079C-A COQ4O13525 335 aa2.32□□□□□ -2.04
TFB5YDR079C-A YUR1P26725 428 aa2.32□□□□□ -2.04
TFB5YDR079C-A RGT1P32862 1170 aa2.32□□□□□ -2.04
TFB5YDR079C-A CCZ1P38273 704 aa2.32□□□□□ -2.04
TFB5YDR079C-A SIP5P40210 489 aaKnown RBP2.32□□□□□ -2.04
TFB5YDR079C-A YAF9P53930 226 aa2.32□□□□□ -2.04
TFB5YDR079C-A NOP12Q08208 459 aaKnown RBP2.32□□□□□ -2.04
TFB5YDR079C-A SPO21Q12411 609 aa2.32□□□□□ -2.04
TFB5YDR079C-A RRN6P32786 894 aa2.31□□□□□ -2.04
TFB5YDR079C-A GLO1P50107 326 aa2.31□□□□□ -2.04
TFB5YDR079C-A RSM24Q03976 319 aa2.31□□□□□ -2.04
TFB5YDR079C-A YKL077WP36081 392 aa2.3□□□□□ -2.04
TFB5YDR079C-A BAP2P38084 609 aa2.3□□□□□ -2.04
TFB5YDR079C-A RPN1P38764 993 aaKnown RBP2.3□□□□□ -2.04
TFB5YDR079C-A PLB1P39105 664 aa2.3□□□□□ -2.04
TFB5YDR079C-A PMT7Q06644 662 aa2.3□□□□□ -2.04
TFB5YDR079C-A RIB2Q12362 591 aaKnown RBP2.3□□□□□ -2.04
TFB5YDR079C-A LSO1Q3E827 93 aa2.3□□□□□ -2.04
TFB5YDR079C-A PFK1P16861 987 aaKnown RBP2.29□□□□□ -2.04
TFB5YDR079C-A STB4P50104 949 aa2.29□□□□□ -2.04
TFB5YDR079C-A GTF1P53260 183 aaPredicted RBP2.29□□□□□ -2.04
TFB5YDR079C-A COQ11Q05892 277 aa2.29□□□□□ -2.04
TFB5YDR079C-A OMS1Q06668 471 aa2.29□□□□□ -2.04
TFB5YDR079C-A LAP2Q10740 671 aa2.29□□□□□ -2.04
TFB5YDR079C-A MTH1P35198 433 aa2.28□□□□□ -2.04
TFB5YDR079C-A QNS1P38795 714 aaKnown RBP2.28□□□□□ -2.04
TFB5YDR079C-A MTR4P47047 1073 aaKnown RBP2.28□□□□□ -2.04
TFB5YDR079C-A EXG2P52911 562 aa2.28□□□□□ -2.04
TFB5YDR079C-A IMO32P53219 342 aa2.28□□□□□ -2.04
TFB5YDR079C-A RSC4Q02206 625 aa2.28□□□□□ -2.04
TFB5YDR079C-A CWC15Q03772 175 aaKnown RBP2.28□□□□□ -2.04
TFB5YDR079C-A RSB1Q08417 382 aa2.28□□□□□ -2.04
TFB5YDR079C-A NOB1Q08444 459 aaKnown RBP2.28□□□□□ -2.04
TFB5YDR079C-A PIK1P39104 1066 aa2.27□□□□□ -2.05
TFB5YDR079C-A GCV2P49095 1034 aa2.27□□□□□ -2.05
TFB5YDR079C-A UTP5Q04177 643 aaKnown RBP2.27□□□□□ -2.05
TFB5YDR079C-A YOL073CQ08232 322 aa2.27□□□□□ -2.05
TFB5YDR079C-A VTS1Q08831 523 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
TFB5YDR079C-A NUT1P53114 1132 aa2.26□□□□□ -2.05
TFB5YDR079C-A YLR040CQ07988 224 aa2.26□□□□□ -2.05
TFB5YDR079C-A YNL162W-AQ3E7A8 72 aa2.26□□□□□ -2.05
TFB5YDR079C-A RFC5P38251 354 aa2.25□□□□□ -2.05
TFB5YDR079C-A XKS1P42826 600 aa2.25□□□□□ -2.05
TFB5YDR079C-A PNP1Q05788 311 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms