RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C YKU70P32807 602 aa7.11□□□□□ -1.27
CDC34YDR054C SLI15P38283 698 aa7.11□□□□□ -1.27
CDC34YDR054C CIC1P38779 376 aaKnown RBP7.11□□□□□ -1.27
CDC34YDR054C PMC1P38929 1173 aaPredicted RBP7.11□□□□□ -1.27
CDC34YDR054C AIM9P40053 627 aaKnown RBP7.11□□□□□ -1.27
CDC34YDR054C CWC24P53769 259 aa7.11□□□□□ -1.27
CDC34YDR054C TRS33Q99394 268 aa7.11□□□□□ -1.27
CDC34YDR054C FLO11P08640 1367 aa7.1□□□□□ -1.27
CDC34YDR054C IME2P32581 645 aa7.1□□□□□ -1.27
CDC34YDR054C MDL2P33311 773 aa7.1□□□□□ -1.27
CDC34YDR054C MSH4P40965 878 aaPredicted RBP7.1□□□□□ -1.27
CDC34YDR054C JJJ2P46997 583 aa7.1□□□□□ -1.27
CDC34YDR054C IRC8P47046 822 aa7.1□□□□□ -1.27
CDC34YDR054C YJR142WP47173 342 aa7.1□□□□□ -1.27
CDC34YDR054C STE20Q03497 939 aaKnown RBP7.1□□□□□ -1.27
CDC34YDR054C ESF1Q06344 628 aaKnown RBP7.1□□□□□ -1.27
CDC34YDR054C PPM2Q08282 695 aa7.1□□□□□ -1.27
CDC34YDR054C TAH18Q12181 623 aa7.1□□□□□ -1.27
CDC34YDR054C ARG82P07250 355 aa7.09□□□□□ -1.27
CDC34YDR054C RNR2P09938 399 aaKnown RBP7.09□□□□□ -1.27
CDC34YDR054C SNF3P10870 884 aa7.09□□□□□ -1.27
CDC34YDR054C BOI1P38041 980 aaKnown RBP7.09□□□□□ -1.27
CDC34YDR054C SOH1P38633 127 aa7.09□□□□□ -1.27
CDC34YDR054C KRI1P42846 591 aaKnown RBP7.09□□□□□ -1.27
CDC34YDR054C NSG2P53898 299 aa7.09□□□□□ -1.27
CDC34YDR054C PRP42Q03776 544 aaKnown RBP7.09□□□□□ -1.27
CDC34YDR054C TRS120Q04183 1289 aa7.09□□□□□ -1.27
CDC34YDR054C DPL1Q05567 589 aa7.09□□□□□ -1.27
CDC34YDR054C UTP13Q05946 817 aaKnown RBP7.09□□□□□ -1.27
CDC34YDR054C TSC13Q99190 310 aa7.09□□□□□ -1.27
CDC34YDR054C CYB2P00175 591 aa7.08□□□□□ -1.28
CDC34YDR054C CHO2P05374 869 aaKnown RBP7.08□□□□□ -1.28
CDC34YDR054C COQ1P18900 473 aa7.08□□□□□ -1.28
CDC34YDR054C RPS7AP26786 190 aaKnown RBP7.08□□□□□ -1.28
CDC34YDR054C GUT2P32191 649 aa7.08□□□□□ -1.28
CDC34YDR054C GCD6P32501 712 aaKnown RBP7.08□□□□□ -1.28
CDC34YDR054C AFG2P32794 780 aa7.08□□□□□ -1.28
CDC34YDR054C PET112P33893 541 aa7.08□□□□□ -1.28
CDC34YDR054C NPA3P47122 385 aa7.08□□□□□ -1.28
CDC34YDR054C CDC73Q06697 393 aa7.08□□□□□ -1.28
CDC34YDR054C RRG1Q12167 365 aaPredicted RBP7.08□□□□□ -1.28
CDC34YDR054C LSO1Q3E827 93 aa7.08□□□□□ -1.28
CDC34YDR054C PHO4P07270 312 aaKnown RBP7.07□□□□□ -1.28
CDC34YDR054C TEC1P18412 486 aa7.07□□□□□ -1.28
CDC34YDR054C IMP2'P32351 346 aa7.07□□□□□ -1.28
CDC34YDR054C MNR2P35724 969 aa7.07□□□□□ -1.28
CDC34YDR054C SHC1P39000 512 aa7.07□□□□□ -1.28
CDC34YDR054C ENP2P48234 707 aaKnown RBP7.07□□□□□ -1.28
CDC34YDR054C SQS1P53866 767 aaKnown RBP7.07□□□□□ -1.28
CDC34YDR054C FRA1Q07825 749 aa7.07□□□□□ -1.28
CDC34YDR054C PSF3Q12146 194 aa7.07□□□□□ -1.28
CDC34YDR054C HTA1P04911 132 aaKnown RBP7.06□□□□□ -1.28
CDC34YDR054C HTA2P04912 132 aa7.06□□□□□ -1.28
CDC34YDR054C STV1P37296 890 aa7.06□□□□□ -1.28
CDC34YDR054C VID28P40547 921 aa7.06□□□□□ -1.28
CDC34YDR054C DJP1P40564 432 aa7.06□□□□□ -1.28
CDC34YDR054C VPS20Q04272 221 aa7.06□□□□□ -1.28
CDC34YDR054C FLO1P32768 1537 aa7.06□□□□□ -1.28
CDC34YDR054C SIS1P25294 352 aaKnown RBP7.05□□□□□ -1.28
CDC34YDR054C PEP3P27801 918 aa7.05□□□□□ -1.28
CDC34YDR054C SKI2P35207 1287 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
CDC34YDR054C RPS26AP39938 119 aaKnown RBP7.05□□□□□ -1.28
CDC34YDR054C RPS26BP39939 119 aaKnown RBP7.05□□□□□ -1.28
CDC34YDR054C SPO22P40511 975 aa7.05□□□□□ -1.28
CDC34YDR054C APL6P46682 809 aa7.05□□□□□ -1.28
CDC34YDR054C PIP2P52960 996 aa7.05□□□□□ -1.28
CDC34YDR054C ATG20Q07528 640 aa7.05□□□□□ -1.28
CDC34YDR054C DUR1,2P32528 1835 aaKnown RBP7.05□□□□□ -1.28
CDC34YDR054C FAS2P19097 1887 aaKnown RBP7.04□□□□□ -1.28
CDC34YDR054C TPM1P17536 199 aaKnown RBP7.04□□□□□ -1.28
CDC34YDR054C NPL4P33755 580 aa7.04□□□□□ -1.28
CDC34YDR054C RRP8P38961 392 aaKnown RBP7.04□□□□□ -1.28
CDC34YDR054C NUP82P40368 713 aa7.04□□□□□ -1.28
CDC34YDR054C DAK2P43550 591 aa7.04□□□□□ -1.28
CDC34YDR054C YFL034WP43564 1073 aa7.04□□□□□ -1.28
CDC34YDR054C VPS4P52917 437 aa7.04□□□□□ -1.28
CDC34YDR054C HDA1P53973 706 aa7.04□□□□□ -1.28
CDC34YDR054C UFD2P54860 961 aa7.04□□□□□ -1.28
CDC34YDR054C YDL121CQ07541 149 aa7.04□□□□□ -1.28
CDC34YDR054C KAR1P11927 433 aa7.03□□□□□ -1.28
CDC34YDR054C RER2P35196 286 aa7.03□□□□□ -1.28
CDC34YDR054C SLN1P39928 1220 aaPredicted RBP7.03□□□□□ -1.28
CDC34YDR054C YEN1P40028 759 aa7.03□□□□□ -1.28
CDC34YDR054C PTK2P47116 818 aaKnown RBP7.03□□□□□ -1.28
CDC34YDR054C ENT3P47160 408 aa7.03□□□□□ -1.28
CDC34YDR054C HUL5P53119 910 aa7.03□□□□□ -1.28
CDC34YDR054C TRM44Q02648 567 aaKnown RBP7.03□□□□□ -1.28
CDC34YDR054C SPN1Q06505 410 aaPredicted RBP7.03□□□□□ -1.28
CDC34YDR054C GPI13Q07830 1017 aa7.03□□□□□ -1.28
CDC34YDR054C YRR1Q12172 810 aa7.03□□□□□ -1.28
CDC34YDR054C PHO8P11491 566 aa7.02□□□□□ -1.29
CDC34YDR054C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
CDC34YDR054C FBP26P32604 452 aa7.02□□□□□ -1.29
CDC34YDR054C CRG1P38892 291 aaRIP-Chip data7.02□□□□□ -1.29not detected
CDC34YDR054C EPL1P43572 832 aa7.02□□□□□ -1.29
CDC34YDR054C DAN4P47179 1161 aa7.02□□□□□ -1.29
CDC34YDR054C CTF18P49956 741 aa7.02□□□□□ -1.29
CDC34YDR054C ARP5P53946 755 aa7.02□□□□□ -1.29
CDC34YDR054C RPS15Q01855 142 aaKnown RBP7.02□□□□□ -1.29
CDC34YDR054C CEF1Q03654 590 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms