RNA–Protein interactions for RNA: YDR012W

RPL4B, Transcript of Ribosomal 60S subunit protein L4B, yeast

Gene RPL4B, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL4B	YDR012W	MET6	P05694	767 aa	Known RBP	11.23	□□□□□ -0.61
RPL4B	YDR012W	SHP1	P34223	423 aa		11.23	□□□□□ -0.61
RPL4B	YDR012W	RXT2	P38255	430 aa		11.23	□□□□□ -0.61
RPL4B	YDR012W	YHL017W	P38745	532 aa		11.23	□□□□□ -0.61
RPL4B	YDR012W	CCT3	P39077	534 aa	Known RBP	11.23	□□□□□ -0.61
RPL4B	YDR012W	BUD6	P41697	788 aa		11.23	□□□□□ -0.61
RPL4B	YDR012W	SLD5	Q03406	294 aa		11.23	□□□□□ -0.61
RPL4B	YDR012W	SWI4	P25302	1093 aa	Known RBP	11.22	□□□□□ -0.61
RPL4B	YDR012W	SEC8	P32855	1065 aa		11.22	□□□□□ -0.61
RPL4B	YDR012W	VPS29	P38759	282 aa		11.22	□□□□□ -0.61
RPL4B	YDR012W	VPS53	P47061	822 aa		11.22	□□□□□ -0.61
RPL4B	YDR012W	MSC6	Q08818	692 aa	Known RBP	11.22	□□□□□ -0.61
RPL4B	YDR012W	MYO1	P08964	1928 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	SES1	P07284	462 aa	Known RBP	11.21	□□□□□ -0.61
RPL4B	YDR012W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.21	□□□□□ -0.61	not detected
RPL4B	YDR012W	MAK11	P20484	414 aa	Known RBP	11.21	□□□□□ -0.61
RPL4B	YDR012W	MCM4	P30665	933 aa	Known RBP	11.21	□□□□□ -0.61
RPL4B	YDR012W	SAS3	P34218	831 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	NDT80	P38830	627 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	RPN10	P38886	268 aa	Known RBP	11.21	□□□□□ -0.61
RPL4B	YDR012W	PCI8	P40512	444 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	ASE1	P50275	885 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	YOR131C	Q12486	218 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	RLF2	Q12495	606 aa		11.21	□□□□□ -0.61
RPL4B	YDR012W	TKL1	P23254	680 aa	Known RBP	11.2	□□□□□ -0.62
RPL4B	YDR012W	PAM1	P37304	830 aa	Known RBP	11.2	□□□□□ -0.62
RPL4B	YDR012W	YJR107W	P47145	328 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	CTF18	P49956	741 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	VPS62	P53285	467 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	YLR407W	Q06070	228 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	ISA1	Q07821	250 aa	Predicted RBP	11.2	□□□□□ -0.62
RPL4B	YDR012W	ERP3	Q12403	225 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	CEX1	Q12453	761 aa		11.2	□□□□□ -0.62
RPL4B	YDR012W	RPL19A	P0CX82	189 aa	Known RBP	11.19	□□□□□ -0.62
RPL4B	YDR012W	RPL19B	P0CX83	189 aa	Predicted RBP	11.19	□□□□□ -0.62
RPL4B	YDR012W	CBP3	P21560	335 aa		11.19	□□□□□ -0.62
RPL4B	YDR012W	TFC4	P33339	1025 aa		11.19	□□□□□ -0.62
RPL4B	YDR012W	TTI1	P36097	1038 aa		11.19	□□□□□ -0.62
RPL4B	YDR012W	PAN5	P38787	379 aa		11.19	□□□□□ -0.62
RPL4B	YDR012W	BNI5	P53890	448 aa	Known RBP	11.19	□□□□□ -0.62
RPL4B	YDR012W	NAF1	P53919	492 aa	Known RBP	11.19	□□□□□ -0.62
RPL4B	YDR012W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.18	□□□□□ -0.62	not detected
RPL4B	YDR012W	ASF1	P32447	279 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	UGA4	P32837	571 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	LDH1	P38139	375 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	REG2	P38232	338 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	ENT3	P47160	408 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	YGL138C	P53122	345 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	BRE5	P53741	515 aa	Known RBP	11.18	□□□□□ -0.62
RPL4B	YDR012W	GIS4	Q04233	774 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	SMD2	Q06217	110 aa	Known RBP	11.18	□□□□□ -0.62
RPL4B	YDR012W	SUT2	Q12286	268 aa		11.18	□□□□□ -0.62
RPL4B	YDR012W	SRO9	P25567	434 aa	Known RBP	11.17	□□□□□ -0.62
RPL4B	YDR012W	SUL1	P38359	859 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	YIR014W	P40570	242 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	HUL5	P53119	910 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	PTA1	Q01329	785 aa	Predicted RBP	11.17	□□□□□ -0.62
RPL4B	YDR012W	CSM3	Q04659	317 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	PIB1	Q06651	286 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	OXR1	Q08952	273 aa		11.17	□□□□□ -0.62
RPL4B	YDR012W	TIM23	P32897	222 aa		11.16	□□□□□ -0.62
RPL4B	YDR012W	ELG1	Q12050	791 aa		11.16	□□□□□ -0.62
RPL4B	YDR012W	HSP82	P02829	709 aa	Known RBP	11.15	□□□□□ -0.62
RPL4B	YDR012W	YUR1	P26725	428 aa		11.15	□□□□□ -0.62
RPL4B	YDR012W	AIM21	P40563	679 aa		11.15	□□□□□ -0.62
RPL4B	YDR012W	OYE2	Q03558	400 aa	Known RBP	11.15	□□□□□ -0.62
RPL4B	YDR012W	VPS20	Q04272	221 aa		11.15	□□□□□ -0.62
RPL4B	YDR012W	TRM11	Q12463	433 aa		11.15	□□□□□ -0.62
RPL4B	YDR012W	GPT2	P36148	743 aa		11.14	□□□□□ -0.63
RPL4B	YDR012W	PRY3	P47033	881 aa		11.14	□□□□□ -0.63
RPL4B	YDR012W	YGL039W	P53183	348 aa	Known RBP	11.14	□□□□□ -0.63
RPL4B	YDR012W	MDM20	Q12387	796 aa	Known RBP	11.14	□□□□□ -0.63
RPL4B	YDR012W	ARP6	Q12509	438 aa		11.14	□□□□□ -0.63
RPL4B	YDR012W	ECM29	P38737	1868 aa		11.14	□□□□□ -0.63
RPL4B	YDR012W	PDC1	P06169	563 aa	Known RBP	11.13	□□□□□ -0.63
RPL4B	YDR012W	DBP1	P24784	617 aa	Known RBP	11.13	□□□□□ -0.63
RPL4B	YDR012W	CLB5	P30283	435 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	MAC1	P35192	417 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	DBP7	P36120	742 aa	Known RBP	11.13	□□□□□ -0.63
RPL4B	YDR012W	KSP1	P38691	1029 aa	Known RBP	11.13	□□□□□ -0.63
RPL4B	YDR012W	RET3	P53600	189 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	DSE4	P53753	1117 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	YMR321C	Q04898	105 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	YLR326W	Q06170	240 aa	Known RBP	11.13	□□□□□ -0.63
RPL4B	YDR012W	TIP41	Q12199	356 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	MAM3	Q12296	706 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	NBL1	Q3E7Y6	73 aa		11.13	□□□□□ -0.63
RPL4B	YDR012W	CDC6	P09119	513 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	POX1	P13711	748 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	THR4	P16120	514 aa	Known RBP	11.12	□□□□□ -0.63
RPL4B	YDR012W	ISW1	P38144	1129 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	RFC5	P38251	354 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	NOC2	P39744	710 aa	Known RBP	11.12	□□□□□ -0.63
RPL4B	YDR012W	HMF1	P40037	129 aa	Known RBP	11.12	□□□□□ -0.63
RPL4B	YDR012W	UBP15	P50101	1230 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	PEX14	P53112	341 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	GET3	Q12154	354 aa	Known RBP	11.12	□□□□□ -0.63
RPL4B	YDR012W	YDR461C-A	Q2V2P7	80 aa		11.12	□□□□□ -0.63
RPL4B	YDR012W	BCS1	P32839	456 aa		11.11	□□□□□ -0.63
RPL4B	YDR012W	UIP5	P36137	443 aa		11.11	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms