RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W HXT17P53631 564 aa4.4□□□□□ -1.71
SHS1YDL225W YNR063WP53749 607 aa4.4□□□□□ -1.71
SHS1YDL225W HXT15P54854 567 aa4.4□□□□□ -1.71
SHS1YDL225W ROD1Q02805 837 aa4.4□□□□□ -1.71
SHS1YDL225W YOR223WQ12015 292 aa4.4□□□□□ -1.71
SHS1YDL225W AI3P03877 415 aa4.39□□□□□ -1.71
SHS1YDL225W ATG14P38270 344 aa4.39□□□□□ -1.71
SHS1YDL225W SPO74P45819 413 aa4.39□□□□□ -1.71
SHS1YDL225W ARI1P53111 347 aaKnown RBP4.39□□□□□ -1.71
SHS1YDL225W YGR045CP53229 120 aa4.39□□□□□ -1.71
SHS1YDL225W YPL034WQ03083 165 aa4.39□□□□□ -1.71
SHS1YDL225W AVO1Q08236 1176 aa4.39□□□□□ -1.71
SHS1YDL225W RER2P35196 286 aa4.38□□□□□ -1.71
SHS1YDL225W NCE103P53615 221 aa4.38□□□□□ -1.71
SHS1YDL225W MCA1Q08601 432 aa4.38□□□□□ -1.71
SHS1YDL225W ELA1P53861 379 aaPredicted RBP4.38□□□□□ -1.71
SHS1YDL225W EEB1Q02891 456 aa4.38□□□□□ -1.71
SHS1YDL225W DOT1Q04089 582 aaKnown RBP4.38□□□□□ -1.71
SHS1YDL225W WRS1Q12109 432 aaKnown RBP4.38□□□□□ -1.71
SHS1YDL225W MKK2P32491 506 aa4.37□□□□□ -1.71
SHS1YDL225W YAR028WP39548 234 aa4.37□□□□□ -1.71
SHS1YDL225W ENT3P47160 408 aa4.37□□□□□ -1.71
SHS1YDL225W TYW3P53177 273 aa4.37□□□□□ -1.71
SHS1YDL225W RKM2Q03942 479 aa4.37□□□□□ -1.71
SHS1YDL225W LAP2Q10740 671 aa4.37□□□□□ -1.71
SHS1YDL225W PRI2P20457 528 aa4.36□□□□□ -1.71
SHS1YDL225W GPT2P36148 743 aa4.36□□□□□ -1.71
SHS1YDL225W RAT1Q02792 1006 aaKnown RBP4.36□□□□□ -1.71
SHS1YDL225W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SHS1YDL225W OPI10Q08202 246 aa4.36□□□□□ -1.71
SHS1YDL225W TRP2P00899 507 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W CHS2P14180 963 aa4.35□□□□□ -1.71
SHS1YDL225W SYP1P25623 870 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W NNF1P47149 201 aa4.35□□□□□ -1.71
SHS1YDL225W SSF2Q12153 453 aaPredicted RBP4.35□□□□□ -1.71
SHS1YDL225W RET1P22276 1149 aaKnown RBP4.35□□□□□ -1.71
SHS1YDL225W AFG2P32794 780 aa4.35□□□□□ -1.71
SHS1YDL225W KAE1P36132 386 aa4.35□□□□□ -1.71
SHS1YDL225W HSE1P38753 452 aa4.35□□□□□ -1.71
SHS1YDL225W PTC5Q12511 572 aa4.35□□□□□ -1.71
SHS1YDL225W BAS1P22035 811 aa4.34□□□□□ -1.71
SHS1YDL225W GRX1P25373 110 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W LYP1P32487 611 aa4.34□□□□□ -1.71
SHS1YDL225W ALG3P38179 458 aa4.34□□□□□ -1.71
SHS1YDL225W MSH4P40965 878 aaPredicted RBP4.34□□□□□ -1.71
SHS1YDL225W TIF35Q04067 274 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W GIC2Q06648 383 aa4.34□□□□□ -1.71
SHS1YDL225W FAL1Q12099 399 aaKnown RBP4.34□□□□□ -1.71
SHS1YDL225W NNK1P36003 928 aa4.33□□□□□ -1.72
SHS1YDL225W YKL069WP36088 180 aa4.33□□□□□ -1.72
SHS1YDL225W QNS1P38795 714 aaKnown RBP4.33□□□□□ -1.72
SHS1YDL225W VPS53P47061 822 aa4.33□□□□□ -1.72
SHS1YDL225W SPO20Q04359 397 aa4.33□□□□□ -1.72
SHS1YDL225W YLR225CQ05948 407 aaKnown RBP4.33□□□□□ -1.72
SHS1YDL225W NFS1P25374 497 aa4.32□□□□□ -1.72
SHS1YDL225W NAM7P30771 971 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W SMY2P32909 740 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W MOT2P34909 587 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W SAF1P38352 637 aa4.32□□□□□ -1.72
SHS1YDL225W OCA5P38738 679 aa4.32□□□□□ -1.72
SHS1YDL225W AKR1P39010 764 aa4.32□□□□□ -1.72
SHS1YDL225W CNN1P43618 361 aa4.32□□□□□ -1.72
SHS1YDL225W RSA3Q05942 220 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W NSI1Q12457 570 aa4.32□□□□□ -1.72
SHS1YDL225W INO1P11986 533 aa4.32□□□□□ -1.72
SHS1YDL225W DBP5P20449 482 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W MAC1P35192 417 aa4.32□□□□□ -1.72
SHS1YDL225W NMD3P38861 518 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W YLR257WQ06146 321 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W TDA5Q06417 326 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W GLT1Q12680 2145 aaKnown RBP4.32□□□□□ -1.72
SHS1YDL225W RPS4AP0CX35 261 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W RPS4BP0CX36 261 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W PUF4P25339 888 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SHS1YDL225W AGP1P25376 633 aa4.31□□□□□ -1.72
SHS1YDL225W MLS1P30952 554 aa4.31□□□□□ -1.72
SHS1YDL225W ABD1P32783 436 aaPredicted RBP4.31□□□□□ -1.72
SHS1YDL225W MCM7P38132 845 aa4.31□□□□□ -1.72
SHS1YDL225W SEA4P38164 1038 aa4.31□□□□□ -1.72
SHS1YDL225W SPF1P39986 1215 aaKnown RBP4.31□□□□□ -1.72
SHS1YDL225W ALT1P52893 592 aa4.31□□□□□ -1.72
SHS1YDL225W ESC2Q06340 456 aa4.31□□□□□ -1.72
SHS1YDL225W AOS1Q06624 347 aa4.31□□□□□ -1.72
SHS1YDL225W KIP1P28742 1111 aa4.3□□□□□ -1.72
SHS1YDL225W RGD1P38339 666 aa4.3□□□□□ -1.72
SHS1YDL225W MPH1P40562 993 aa4.3□□□□□ -1.72
SHS1YDL225W KRI1P42846 591 aaKnown RBP4.3□□□□□ -1.72
SHS1YDL225W YGL176CP46945 554 aa4.3□□□□□ -1.72
SHS1YDL225W MED7Q08278 222 aa4.3□□□□□ -1.72
SHS1YDL225W YOL098CQ12496 1037 aa4.3□□□□□ -1.72
SHS1YDL225W OMA1P36163 345 aa4.29□□□□□ -1.72
SHS1YDL225W TAT2P38967 592 aa4.29□□□□□ -1.72
SHS1YDL225W YJL049WP47048 450 aa4.29□□□□□ -1.72
SHS1YDL225W ALO1P54783 526 aaKnown RBP4.29□□□□□ -1.72
SHS1YDL225W EAR1Q03212 550 aa4.29□□□□□ -1.72
SHS1YDL225W SBA1P28707 216 aaKnown RBP4.29□□□□□ -1.72
SHS1YDL225W MMM1P41800 426 aa4.29□□□□□ -1.72
SHS1YDL225W YGR130CP53278 816 aa4.29□□□□□ -1.72
SHS1YDL225W TPP1Q03796 238 aa4.29□□□□□ -1.72
SHS1YDL225W SHE9Q04172 456 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms