RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W PXA1P41909 870 aa7.24□□□□□ -1.25
BDF2YDL070W YGR237CP50089 785 aa7.24□□□□□ -1.25
BDF2YDL070W NCS2P53923 493 aaPredicted RBP7.24□□□□□ -1.25
BDF2YDL070W MEC3Q02574 474 aa7.24□□□□□ -1.25
BDF2YDL070W YLR001CQ07895 862 aa7.24□□□□□ -1.25
BDF2YDL070W GYP5Q12344 894 aa7.24□□□□□ -1.25
BDF2YDL070W MAK11P20484 414 aaKnown RBP7.23□□□□□ -1.25
BDF2YDL070W SET1P38827 1080 aaKnown RBP7.23□□□□□ -1.25
BDF2YDL070W HUL5P53119 910 aa7.23□□□□□ -1.25
BDF2YDL070W SPO11P23179 398 aa7.23□□□□□ -1.25
BDF2YDL070W SEC8P32855 1065 aa7.23□□□□□ -1.25
BDF2YDL070W YMR147WP40218 223 aaKnown RBP7.23□□□□□ -1.25
BDF2YDL070W SEC5P89102 971 aa7.23□□□□□ -1.25
BDF2YDL070W EBS1Q03466 884 aaKnown RBP7.23□□□□□ -1.25
BDF2YDL070W INP54Q08227 384 aaKnown RBP7.23□□□□□ -1.25
BDF2YDL070W LAM4P38800 1345 aa7.22□□□□□ -1.25
BDF2YDL070W MPH3P0CE00 602 aa7.22□□□□□ -1.25
BDF2YDL070W CKI1P20485 582 aa7.22□□□□□ -1.25
BDF2YDL070W RAD5P32849 1169 aaPredicted RBP7.22□□□□□ -1.25
BDF2YDL070W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
BDF2YDL070W RPG1P38249 964 aaKnown RBP7.22□□□□□ -1.25
BDF2YDL070W YMR124WP39523 943 aaKnown RBP7.22□□□□□ -1.25
BDF2YDL070W ADA2Q02336 434 aa7.22□□□□□ -1.25
BDF2YDL070W UME1Q03010 460 aa7.22□□□□□ -1.25
BDF2YDL070W UBX2Q04228 584 aa7.22□□□□□ -1.25
BDF2YDL070W CDC6P09119 513 aa7.21□□□□□ -1.25
BDF2YDL070W CDC10P25342 322 aaKnown RBP7.21□□□□□ -1.25
BDF2YDL070W BUD14P27637 709 aa7.21□□□□□ -1.25
BDF2YDL070W MIP6P38760 659 aaKnown RBP7.21□□□□□ -1.25
BDF2YDL070W PKH3Q03306 898 aaPredicted RBP7.21□□□□□ -1.25
BDF2YDL070W DPL1Q05567 589 aa7.21□□□□□ -1.25
BDF2YDL070W EST2Q06163 884 aa7.21□□□□□ -1.25
BDF2YDL070W CSC1Q06538 782 aa7.21□□□□□ -1.25
BDF2YDL070W SLP1Q12232 587 aa7.21□□□□□ -1.25
BDF2YDL070W HAA1Q12753 694 aaKnown RBP7.21□□□□□ -1.25
BDF2YDL070W TOM70P07213 617 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W PIF1P07271 859 aa7.21□□□□□ -1.26
BDF2YDL070W SEC18P18759 758 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W VPS1P21576 704 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W BMH1P29311 267 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W APL2P36000 726 aaPredicted RBP7.21□□□□□ -1.26
BDF2YDL070W LAS1P36146 502 aaPredicted RBP7.21□□□□□ -1.26
BDF2YDL070W AKR1P39010 764 aa7.21□□□□□ -1.26
BDF2YDL070W TIF4632P39936 914 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W YAP5P40574 245 aa7.21□□□□□ -1.26
BDF2YDL070W ZPR1P53303 486 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W LSC2P53312 427 aa7.21□□□□□ -1.26
BDF2YDL070W CUS1Q02554 436 aaPredicted RBP7.21□□□□□ -1.26
BDF2YDL070W TFB2Q02939 513 aa7.21□□□□□ -1.26
BDF2YDL070W ERV41Q04651 352 aa7.21□□□□□ -1.26
BDF2YDL070W SOV1Q04748 898 aa7.21□□□□□ -1.26
BDF2YDL070W YLR177WQ06251 628 aa7.21□□□□□ -1.26
BDF2YDL070W GET3Q12154 354 aaKnown RBP7.21□□□□□ -1.26
BDF2YDL070W ARG4P04076 463 aaPredicted RBP7.2□□□□□ -1.26
BDF2YDL070W CLB4P24871 460 aa7.2□□□□□ -1.26
BDF2YDL070W PDC6P26263 563 aaKnown RBP7.2□□□□□ -1.26
BDF2YDL070W LOS1P33418 1100 aaPredicted RBP7.2□□□□□ -1.26
BDF2YDL070W SIP3P38717 1229 aa7.2□□□□□ -1.26
BDF2YDL070W FAR11P53917 953 aa7.2□□□□□ -1.26
BDF2YDL070W NEW1Q08972 1196 aaKnown RBP7.2□□□□□ -1.26
BDF2YDL070W SSF2Q12153 453 aaPredicted RBP7.2□□□□□ -1.26
BDF2YDL070W SAC3P46674 1301 aa7.2□□□□□ -1.26
BDF2YDL070W GCD2P12754 651 aaPredicted RBP7.19□□□□□ -1.26
BDF2YDL070W SPP381P38282 291 aaPredicted RBP7.19□□□□□ -1.26
BDF2YDL070W VFA1P40080 203 aa7.19□□□□□ -1.26
BDF2YDL070W MAD1P40957 749 aa7.19□□□□□ -1.26
BDF2YDL070W VPS53P47061 822 aa7.19□□□□□ -1.26
BDF2YDL070W ENP2P48234 707 aaKnown RBP7.19□□□□□ -1.26
BDF2YDL070W HFM1P51979 1187 aa7.19□□□□□ -1.26
BDF2YDL070W YNL193WP53870 558 aa7.19□□□□□ -1.26
BDF2YDL070W ADE16P54113 591 aaKnown RBP7.19□□□□□ -1.26
BDF2YDL070W BET4Q00618 327 aa7.19□□□□□ -1.26
BDF2YDL070W FRK1Q03002 865 aaPredicted RBP7.19□□□□□ -1.26
BDF2YDL070W POB3Q04636 552 aaKnown RBP7.19□□□□□ -1.26
BDF2YDL070W MMR1Q06324 491 aa7.19□□□□□ -1.26
BDF2YDL070W RRP15Q06511 250 aaPredicted RBP7.19□□□□□ -1.26
BDF2YDL070W SWI4P25302 1093 aaKnown RBP7.19□□□□□ -1.26
BDF2YDL070W PSO2P30620 661 aa7.19□□□□□ -1.26
BDF2YDL070W RER2P35196 286 aa7.19□□□□□ -1.26
BDF2YDL070W MET1P36150 593 aa7.19□□□□□ -1.26
BDF2YDL070W CRG1P38892 291 aaRIP-Chip data7.19□□□□□ -1.26not detected
BDF2YDL070W AAD16Q02895 342 aa7.19□□□□□ -1.26
BDF2YDL070W YPL109CQ02981 657 aa7.19□□□□□ -1.26
BDF2YDL070W FCP1Q03254 732 aa7.19□□□□□ -1.26
BDF2YDL070W PKH1Q03407 766 aa7.19□□□□□ -1.26
BDF2YDL070W GRX3Q03835 250 aa7.19□□□□□ -1.26
BDF2YDL070W VTI1Q04338 217 aa7.19□□□□□ -1.26
BDF2YDL070W SPN1Q06505 410 aaPredicted RBP7.19□□□□□ -1.26
BDF2YDL070W PSR2Q07949 397 aa7.19□□□□□ -1.26
BDF2YDL070W SUP35P05453 685 aaKnown RBP7.18□□□□□ -1.26
BDF2YDL070W KAR3P17119 729 aa7.18□□□□□ -1.26
BDF2YDL070W IME1P21190 360 aa7.18□□□□□ -1.26
BDF2YDL070W UBP14P38237 781 aaKnown RBP7.18□□□□□ -1.26
BDF2YDL070W GTR1Q00582 310 aa7.18□□□□□ -1.26
BDF2YDL070W URH1Q04179 340 aa7.18□□□□□ -1.26
BDF2YDL070W YMR114CQ04471 368 aaKnown RBP7.18□□□□□ -1.26
BDF2YDL070W MRD1Q06106 887 aaKnown RBP7.18□□□□□ -1.26
BDF2YDL070W SPP382Q06411 708 aaPredicted RBP7.18□□□□□ -1.26
BDF2YDL070W PTC5Q12511 572 aa7.18□□□□□ -1.26
BDF2YDL070W PPR1P07272 904 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms