RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF2	YDL070W	PXA1	P41909	870 aa		7.24	□□□□□ -1.25
BDF2	YDL070W	YGR237C	P50089	785 aa		7.24	□□□□□ -1.25
BDF2	YDL070W	NCS2	P53923	493 aa	Predicted RBP	7.24	□□□□□ -1.25
BDF2	YDL070W	MEC3	Q02574	474 aa		7.24	□□□□□ -1.25
BDF2	YDL070W	YLR001C	Q07895	862 aa		7.24	□□□□□ -1.25
BDF2	YDL070W	GYP5	Q12344	894 aa		7.24	□□□□□ -1.25
BDF2	YDL070W	MAK11	P20484	414 aa	Known RBP	7.23	□□□□□ -1.25
BDF2	YDL070W	SET1	P38827	1080 aa	Known RBP	7.23	□□□□□ -1.25
BDF2	YDL070W	HUL5	P53119	910 aa		7.23	□□□□□ -1.25
BDF2	YDL070W	SPO11	P23179	398 aa		7.23	□□□□□ -1.25
BDF2	YDL070W	SEC8	P32855	1065 aa		7.23	□□□□□ -1.25
BDF2	YDL070W	YMR147W	P40218	223 aa	Known RBP	7.23	□□□□□ -1.25
BDF2	YDL070W	SEC5	P89102	971 aa		7.23	□□□□□ -1.25
BDF2	YDL070W	EBS1	Q03466	884 aa	Known RBP	7.23	□□□□□ -1.25
BDF2	YDL070W	INP54	Q08227	384 aa	Known RBP	7.23	□□□□□ -1.25
BDF2	YDL070W	LAM4	P38800	1345 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	MPH3	P0CE00	602 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	CKI1	P20485	582 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	RAD5	P32849	1169 aa	Predicted RBP	7.22	□□□□□ -1.25
BDF2	YDL070W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.22	□□□□□ -1.25	not detected
BDF2	YDL070W	RPG1	P38249	964 aa	Known RBP	7.22	□□□□□ -1.25
BDF2	YDL070W	YMR124W	P39523	943 aa	Known RBP	7.22	□□□□□ -1.25
BDF2	YDL070W	ADA2	Q02336	434 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	UME1	Q03010	460 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	UBX2	Q04228	584 aa		7.22	□□□□□ -1.25
BDF2	YDL070W	CDC6	P09119	513 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	CDC10	P25342	322 aa	Known RBP	7.21	□□□□□ -1.25
BDF2	YDL070W	BUD14	P27637	709 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	MIP6	P38760	659 aa	Known RBP	7.21	□□□□□ -1.25
BDF2	YDL070W	PKH3	Q03306	898 aa	Predicted RBP	7.21	□□□□□ -1.25
BDF2	YDL070W	DPL1	Q05567	589 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	EST2	Q06163	884 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	CSC1	Q06538	782 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	SLP1	Q12232	587 aa		7.21	□□□□□ -1.25
BDF2	YDL070W	HAA1	Q12753	694 aa	Known RBP	7.21	□□□□□ -1.25
BDF2	YDL070W	TOM70	P07213	617 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	PIF1	P07271	859 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	SEC18	P18759	758 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	VPS1	P21576	704 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	BMH1	P29311	267 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	APL2	P36000	726 aa	Predicted RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	LAS1	P36146	502 aa	Predicted RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	AKR1	P39010	764 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	TIF4632	P39936	914 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	YAP5	P40574	245 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	ZPR1	P53303	486 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	LSC2	P53312	427 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	CUS1	Q02554	436 aa	Predicted RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	TFB2	Q02939	513 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	ERV41	Q04651	352 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	SOV1	Q04748	898 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	YLR177W	Q06251	628 aa		7.21	□□□□□ -1.26
BDF2	YDL070W	GET3	Q12154	354 aa	Known RBP	7.21	□□□□□ -1.26
BDF2	YDL070W	ARG4	P04076	463 aa	Predicted RBP	7.2	□□□□□ -1.26
BDF2	YDL070W	CLB4	P24871	460 aa		7.2	□□□□□ -1.26
BDF2	YDL070W	PDC6	P26263	563 aa	Known RBP	7.2	□□□□□ -1.26
BDF2	YDL070W	LOS1	P33418	1100 aa	Predicted RBP	7.2	□□□□□ -1.26
BDF2	YDL070W	SIP3	P38717	1229 aa		7.2	□□□□□ -1.26
BDF2	YDL070W	FAR11	P53917	953 aa		7.2	□□□□□ -1.26
BDF2	YDL070W	NEW1	Q08972	1196 aa	Known RBP	7.2	□□□□□ -1.26
BDF2	YDL070W	SSF2	Q12153	453 aa	Predicted RBP	7.2	□□□□□ -1.26
BDF2	YDL070W	SAC3	P46674	1301 aa		7.2	□□□□□ -1.26
BDF2	YDL070W	GCD2	P12754	651 aa	Predicted RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	SPP381	P38282	291 aa	Predicted RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	VFA1	P40080	203 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	MAD1	P40957	749 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	VPS53	P47061	822 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	ENP2	P48234	707 aa	Known RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	HFM1	P51979	1187 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	YNL193W	P53870	558 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	ADE16	P54113	591 aa	Known RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	BET4	Q00618	327 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	FRK1	Q03002	865 aa	Predicted RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	POB3	Q04636	552 aa	Known RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	MMR1	Q06324	491 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	RRP15	Q06511	250 aa	Predicted RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	SWI4	P25302	1093 aa	Known RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	PSO2	P30620	661 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	RER2	P35196	286 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	MET1	P36150	593 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	CRG1	P38892	291 aa	RIP-Chip data	7.19	□□□□□ -1.26	not detected
BDF2	YDL070W	AAD16	Q02895	342 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	YPL109C	Q02981	657 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	FCP1	Q03254	732 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	PKH1	Q03407	766 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	GRX3	Q03835	250 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	VTI1	Q04338	217 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	SPN1	Q06505	410 aa	Predicted RBP	7.19	□□□□□ -1.26
BDF2	YDL070W	PSR2	Q07949	397 aa		7.19	□□□□□ -1.26
BDF2	YDL070W	SUP35	P05453	685 aa	Known RBP	7.18	□□□□□ -1.26
BDF2	YDL070W	KAR3	P17119	729 aa		7.18	□□□□□ -1.26
BDF2	YDL070W	IME1	P21190	360 aa		7.18	□□□□□ -1.26
BDF2	YDL070W	UBP14	P38237	781 aa	Known RBP	7.18	□□□□□ -1.26
BDF2	YDL070W	GTR1	Q00582	310 aa		7.18	□□□□□ -1.26
BDF2	YDL070W	URH1	Q04179	340 aa		7.18	□□□□□ -1.26
BDF2	YDL070W	YMR114C	Q04471	368 aa	Known RBP	7.18	□□□□□ -1.26
BDF2	YDL070W	MRD1	Q06106	887 aa	Known RBP	7.18	□□□□□ -1.26
BDF2	YDL070W	SPP382	Q06411	708 aa	Predicted RBP	7.18	□□□□□ -1.26
BDF2	YDL070W	PTC5	Q12511	572 aa		7.18	□□□□□ -1.26
BDF2	YDL070W	PPR1	P07272	904 aa	Predicted RBP	7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms