RNA–Protein interactions for RNA: YBR058C

UBP14, Transcript of Ubiquitin-specific protease, yeast

Gene UBP14, Length 2,346 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP14	YBR058C	VPS75	P53853	264 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	PUS5	Q06244	254 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	AOS1	Q06624	347 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	PSK2	Q08217	1101 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	ATG9	Q12142	997 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	ENO2	P00925	437 aa	Known RBP	3.31	□□□□□ -1.88
UBP14	YBR058C	RDS2	P19541	446 aa	Known RBP	3.31	□□□□□ -1.88
UBP14	YBR058C	SEC9	P40357	651 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	PIB2	P53191	635 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	MAL13	P53338	473 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	YNL108C	P53929	270 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	ALO1	P54783	526 aa	Known RBP	3.31	□□□□□ -1.88
UBP14	YBR058C	HOT1	Q03213	719 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	MRX10	Q05648	414 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	OMS1	Q06668	471 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	FRA1	Q07825	749 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	YOR223W	Q12015	292 aa		3.31	□□□□□ -1.88
UBP14	YBR058C	PGA3	Q12746	312 aa	Known RBP	3.31	□□□□□ -1.88
UBP14	YBR058C	RAD4	P14736	754 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	PHO13	P19881	312 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	MCM4	P30665	933 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	STO1	P34160	861 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	YKT6	P36015	200 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	RFT1	P38206	574 aa	Predicted RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	YHL017W	P38745	532 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	CCC2	P38995	1004 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	CAJ1	P39101	391 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	NDC80	P40460	691 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	AIR1	P40507	360 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	HUL4	P40985	892 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	FRK1	Q03002	865 aa	Predicted RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	YDR338C	Q05497	695 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	ATG23	Q06671	453 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	YEL077C	Q3E7X8	1277 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	RAD3	P06839	778 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	RAD51	P25454	400 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	CIC1	P38779	376 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	RIO2	P40160	425 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	ALF1	P53904	254 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	BOP3	P53958	396 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	HED1	Q03937	162 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	ITT1	Q04638	464 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	NCB2	Q92317	146 aa		3.3	□□□□□ -1.88
UBP14	YBR058C	RRP5	Q05022	1729 aa	Known RBP	3.3	□□□□□ -1.88
UBP14	YBR058C	MATALPHA2	P0CY08	210 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	HMLALPHA2	P0CY09	210 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	PRP16	P15938	1071 aa	Predicted RBP	3.29	□□□□□ -1.88
UBP14	YBR058C	SEC14	P24280	304 aa	Known RBP	3.29	□□□□□ -1.88
UBP14	YBR058C	UGA3	P26370	528 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	YJR079W	P47126	109 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	TAN1	P53072	289 aa	Predicted RBP	3.29	□□□□□ -1.88
UBP14	YBR058C	MLC1	P53141	149 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	ZDS2	P54786	942 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	DNM1	P54861	757 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	NSE3	Q05541	303 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	YLR407W	Q06070	228 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	SDH5	Q08230	162 aa		3.29	□□□□□ -1.88
UBP14	YBR058C	TEC1	P18412	486 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	FBP26	P32604	452 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	YEL043W	P32618	956 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	MRT4	P33201	236 aa	Known RBP	3.28	□□□□□ -1.88
UBP14	YBR058C	HEL1	P36113	551 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	NUP133	P36161	1157 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	SPT8	P38915	602 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	MIC19	P43594	170 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	YJR142W	P47173	342 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	NNF2	P53253	936 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	YNR029C	P53729	429 aa	Known RBP	3.28	□□□□□ -1.88
UBP14	YBR058C	ECM23	Q02710	187 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	VPS38	Q05919	439 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	MET32	Q12041	191 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	YOL098C	Q12496	1037 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	VPS8	P39702	1274 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	BUD16	P39988	312 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	YKE2	P52553	114 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	VTC3	Q02725	835 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	VPS30	Q02948	557 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	STE23	Q06010	1027 aa		3.28	□□□□□ -1.88
UBP14	YBR058C	RUD3	Q12234	484 aa	Known RBP	3.28	□□□□□ -1.88
UBP14	YBR058C	TOP1	P04786	769 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	RAD1	P06777	1100 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	ARD1	P07347	238 aa	Predicted RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	PMR1	P13586	950 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	SEC23	P15303	768 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.27	□□□□□ -1.89	not detected
UBP14	YBR058C	CDC60	P26637	1090 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	ISF1	P32488	338 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	ZUO1	P32527	433 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	RTG2	P32608	588 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	SHM1	P37292	490 aa	Predicted RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	STM1	P39015	273 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	UBP12	P39538	1254 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	BUD6	P41697	788 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	EMW1	P42842	904 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	EMP47	P43555	445 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	SYH1	Q02875	849 aa	Known RBP	3.27	□□□□□ -1.89
UBP14	YBR058C	MDM38	Q08179	573 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	YIL177C	P40434	1758 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	YJL225C	P40889	1758 aa		3.27	□□□□□ -1.89
UBP14	YBR058C	ENO1	P00924	437 aa	Known RBP	3.27	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms