RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 VARSP26640 1264 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-230ENST00000590638 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-230ENST00000590638 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
NEDD4L-230ENST00000590638 EHBP1Q8NDI1 1231 aa12.01□□□□□ -0.49
NEDD4L-230ENST00000590638 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
NEDD4L-230ENST00000590638 PHTF2Q8N3S3 785 aa12□□□□□ -0.49
NEDD4L-230ENST00000590638 MKRN1Q9UHC7 482 aaKnown RBP12□□□□□ -0.49
NEDD4L-230ENST00000590638 USTQ9Y2C2 406 aa12□□□□□ -0.49
NEDD4L-230ENST00000590638 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-230ENST00000590638 KANK4Q5T7N3 995 aaPredicted RBP11.99□□□□□ -0.49
NEDD4L-230ENST00000590638 C1QTNF2Q9BXJ5 285 aa11.99□□□□□ -0.49
NEDD4L-230ENST00000590638 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
NEDD4L-230ENST00000590638 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 RAB15P59190 212 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 OXLD1Q5BKU9 147 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 TRMT44Q8IYL2 757 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 KCTD17Q8N5Z5 321 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 NOD1Q9Y239 953 aa11.98□□□□□ -0.49
NEDD4L-230ENST00000590638 RASA1P20936 1047 aa11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 VASH1Q7L8A9 365 aaPredicted RBP11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 TRIM50Q86XT4 487 aa11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
NEDD4L-230ENST00000590638 SKOR1P84550 965 aa11.96□□□□□ -0.49
NEDD4L-230ENST00000590638 KCTD15Q96SI1 283 aaPredicted RBP11.96□□□□□ -0.49
NEDD4L-230ENST00000590638 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 PCDHB11Q9Y5F2 797 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 EFCAB5A4FU69 1503 aa11.95□□□□□ -0.5
NEDD4L-230ENST00000590638 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 ATP1A2P50993 1020 aa11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 NOVA2Q9UNW9 492 aaKnown RBP11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 RBM19Q9Y4C8 960 aaKnown RBP11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
NEDD4L-230ENST00000590638 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L10C9JJH3 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L12C9JPN9 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L21D6R901 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 ELOAQ14241 798 aaKnown RBP11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
NEDD4L-230ENST00000590638 ESPNB1AK53 854 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 MYCP01106 439 aaPredicted RBP11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 SLC19A1P41440 591 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 USP4Q13107 963 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 MAP4K5Q9Y4K4 846 aa11.91□□□□□ -0.5
NEDD4L-230ENST00000590638 PSME1Q06323 249 aa11.9□□□□□ -0.5
NEDD4L-230ENST00000590638 NUP160Q12769 1436 aa11.9□□□□□ -0.5
NEDD4L-230ENST00000590638 CRTC2Q53ET0 693 aaPredicted RBP11.9□□□□□ -0.5
NEDD4L-230ENST00000590638 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
NEDD4L-230ENST00000590638 DNAAF2Q9NVR5 837 aaKnown RBP11.9□□□□□ -0.5
NEDD4L-230ENST00000590638 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
NEDD4L-230ENST00000590638 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
NEDD4L-230ENST00000590638 CHD1O14646 1710 aa11.89□□□□□ -0.51
NEDD4L-230ENST00000590638 CEP170Q5SW79 1584 aa11.88□□□□□ -0.51
NEDD4L-230ENST00000590638 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
NEDD4L-230ENST00000590638 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
NEDD4L-230ENST00000590638 GTF2IP78347 998 aa11.88□□□□□ -0.51
NEDD4L-230ENST00000590638 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
NEDD4L-230ENST00000590638 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 FSHRP23945 695 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 PTK7Q13308 1070 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 INTS6LQ5JSJ4 861 aaKnown RBP11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
NEDD4L-230ENST00000590638 BRD1O95696 1058 aa11.86□□□□□ -0.51
NEDD4L-230ENST00000590638 DHX9Q08211 1270 aaKnown RBP11.86□□□□□ -0.51
NEDD4L-230ENST00000590638 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
NEDD4L-230ENST00000590638 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
NEDD4L-230ENST00000590638 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
NEDD4L-230ENST00000590638 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms