RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 AEBP2Q6ZN18 517 aaPredicted RBP29.16■■■□□ 2.26
NEDD4L-230ENST00000590638 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
NEDD4L-230ENST00000590638 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
NEDD4L-230ENST00000590638 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
NEDD4L-230ENST00000590638 PLPPR3Q6T4P5 718 aa23.93■■□□□ 1.42
NEDD4L-230ENST00000590638 FOXD1Q16676 465 aa22.86■■□□□ 1.25
NEDD4L-230ENST00000590638 ADRA2BP18089 450 aa22.47■■□□□ 1.19
NEDD4L-230ENST00000590638 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
NEDD4L-230ENST00000590638 PIAS4Q8N2W9 510 aaPredicted RBP21.79■■□□□ 1.08
NEDD4L-230ENST00000590638 KCNA4P22459 653 aa21.25■□□□□ 0.99
NEDD4L-230ENST00000590638 PPP4R3CPQ6ZMV5 832 aa21.14■□□□□ 0.97
NEDD4L-230ENST00000590638 MSH5O43196 834 aa20.96■□□□□ 0.95
NEDD4L-230ENST00000590638 NCBP3Q53F19 620 aaKnown RBP20.84■□□□□ 0.93
NEDD4L-230ENST00000590638 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
NEDD4L-230ENST00000590638 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
NEDD4L-230ENST00000590638 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
NEDD4L-230ENST00000590638 NPM3O75607 178 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-230ENST00000590638 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
NEDD4L-230ENST00000590638 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
NEDD4L-230ENST00000590638 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
NEDD4L-230ENST00000590638 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
NEDD4L-230ENST00000590638 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
NEDD4L-230ENST00000590638 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
NEDD4L-230ENST00000590638 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
NEDD4L-230ENST00000590638 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
NEDD4L-230ENST00000590638 ZBTB22O15209 634 aa19.49■□□□□ 0.71
NEDD4L-230ENST00000590638 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
NEDD4L-230ENST00000590638 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
NEDD4L-230ENST00000590638 SLC4A2P04920 1241 aa19.08■□□□□ 0.64
NEDD4L-230ENST00000590638 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
NEDD4L-230ENST00000590638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.67e-7■■□□□ 12.6
NEDD4L-230ENST00000590638 ATXN8OSP0DMR3 200 aa18.69■□□□□ 0.58
NEDD4L-230ENST00000590638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
NEDD4L-230ENST00000590638 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
NEDD4L-230ENST00000590638 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
NEDD4L-230ENST00000590638 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
NEDD4L-230ENST00000590638 APLP2Q06481 763 aa18.27■□□□□ 0.52
NEDD4L-230ENST00000590638 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
NEDD4L-230ENST00000590638 FKBP8Q14318 412 aa18.04■□□□□ 0.48
NEDD4L-230ENST00000590638 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
NEDD4L-230ENST00000590638 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
NEDD4L-230ENST00000590638 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
NEDD4L-230ENST00000590638 CAPN15O75808 1086 aa17.81■□□□□ 0.44
NEDD4L-230ENST00000590638 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-230ENST00000590638 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
NEDD4L-230ENST00000590638 POLA2Q14181 598 aa17.65■□□□□ 0.42
NEDD4L-230ENST00000590638 FBLN2P98095 1184 aa17.64■□□□□ 0.41
NEDD4L-230ENST00000590638 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
NEDD4L-230ENST00000590638 ABCB7O75027 752 aa17.49■□□□□ 0.39
NEDD4L-230ENST00000590638 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
NEDD4L-230ENST00000590638 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
NEDD4L-230ENST00000590638 AMER1Q5JTC6 1135 aaPredicted RBP17.43■□□□□ 0.38
NEDD4L-230ENST00000590638 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
NEDD4L-230ENST00000590638 NISCHQ9Y2I1 1504 aa17.38■□□□□ 0.37
NEDD4L-230ENST00000590638 RTN4Q9NQC3 1192 aaKnown RBP17.33■□□□□ 0.36
NEDD4L-230ENST00000590638 FBXO3Q9UK99 471 aa17.3■□□□□ 0.36
NEDD4L-230ENST00000590638 DSG3P32926 999 aa17.27■□□□□ 0.36
NEDD4L-230ENST00000590638 PROM2Q8N271 834 aa17.12■□□□□ 0.33
NEDD4L-230ENST00000590638 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-230ENST00000590638 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
NEDD4L-230ENST00000590638 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
NEDD4L-230ENST00000590638 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
NEDD4L-230ENST00000590638 VASPP50552 380 aaPredicted RBP16.97■□□□□ 0.31
NEDD4L-230ENST00000590638 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
NEDD4L-230ENST00000590638 SSUH2Q9Y2M2 353 aa16.83■□□□□ 0.28
NEDD4L-230ENST00000590638 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
NEDD4L-230ENST00000590638 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
NEDD4L-230ENST00000590638 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-230ENST00000590638 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
NEDD4L-230ENST00000590638 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
NEDD4L-230ENST00000590638 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
NEDD4L-230ENST00000590638 MIER1Q8N108 512 aa16.57■□□□□ 0.24
NEDD4L-230ENST00000590638 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
NEDD4L-230ENST00000590638 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
NEDD4L-230ENST00000590638 SPOCK2Q92563 424 aa16.54■□□□□ 0.24
NEDD4L-230ENST00000590638 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
NEDD4L-230ENST00000590638 ZBTB47Q9UFB7 747 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-230ENST00000590638 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
NEDD4L-230ENST00000590638 SPDYE1Q8NFV5 336 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-230ENST00000590638 PKD2Q13563 968 aa16.37■□□□□ 0.21
NEDD4L-230ENST00000590638 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
NEDD4L-230ENST00000590638 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
NEDD4L-230ENST00000590638 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-230ENST00000590638 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
NEDD4L-230ENST00000590638 PRR29P0C7W0 189 aa16.23■□□□□ 0.19
NEDD4L-230ENST00000590638 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
NEDD4L-230ENST00000590638 GSE1Q14687 1217 aa16.06■□□□□ 0.16
NEDD4L-230ENST00000590638 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
NEDD4L-230ENST00000590638 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
NEDD4L-230ENST00000590638 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
NEDD4L-230ENST00000590638 RGL2O15211 777 aa16.03■□□□□ 0.16
NEDD4L-230ENST00000590638 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
NEDD4L-230ENST00000590638 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
NEDD4L-230ENST00000590638 NUBP1P53384 320 aa15.96■□□□□ 0.15
NEDD4L-230ENST00000590638 FAM212AQ96EL1 285 aa15.95■□□□□ 0.14
NEDD4L-230ENST00000590638 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
NEDD4L-230ENST00000590638 BBXQ8WY36 941 aaPredicted RBP15.93■□□□□ 0.14
NEDD4L-230ENST00000590638 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
NEDD4L-230ENST00000590638 MNX1P50219 401 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-230ENST00000590638 CHGAP10645 457 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms