RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 RABGEF1Q9UJ41 708 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 PCDHGA11Q9Y5H2 935 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 ATP1A2P50993 1020 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 POTEHQ6S545 545 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 POTEEQ6S8J3 1075 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 ANKRD13AQ8IZ07 590 aa6.41□□□□□ -1.38
DHX40-204ENST00000577549 ARAP1Q96P48 1450 aa6.4□□□□□ -1.38
DHX40-204ENST00000577549 MAP7D1Q3KQU3 841 aa6.4□□□□□ -1.38
DHX40-204ENST00000577549 WWC3Q9ULE0 1092 aa6.4□□□□□ -1.38
DHX40-204ENST00000577549 DOLKQ9UPQ8 538 aa6.4□□□□□ -1.38
DHX40-204ENST00000577549 GIGYF1O75420 1035 aaPredicted RBP6.4□□□□□ -1.39
DHX40-204ENST00000577549 HDGFP51858 240 aaKnown RBP6.4□□□□□ -1.39
DHX40-204ENST00000577549 PSME1Q06323 249 aa6.4□□□□□ -1.39
DHX40-204ENST00000577549 TRIM50Q86XT4 487 aa6.4□□□□□ -1.39
DHX40-204ENST00000577549 TMEM87AQ8NBN3 555 aa6.4□□□□□ -1.39
DHX40-204ENST00000577549 ZSWIM6Q9HCJ5 1215 aa6.4□□□□□ -1.39
DHX40-204ENST00000577549 IQSEC3Q9UPP2 1182 aaPredicted RBP6.4□□□□□ -1.39
DHX40-204ENST00000577549 AXIN2Q9Y2T1 843 aa6.4□□□□□ -1.39
DHX40-204ENST00000577549 RIMBP2O15034 1052 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 PTK2Q05397 1052 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 FAM98CQ17RN3 349 aaKnown RBP6.39□□□□□ -1.39
DHX40-204ENST00000577549 BRICD5Q6PL45 260 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 DHX37Q8IY37 1157 aaKnown RBP6.39□□□□□ -1.39
DHX40-204ENST00000577549 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 NCLP19338 710 aaKnown RBP6.39□□□□□ -1.39
DHX40-204ENST00000577549 WEE1P30291 646 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 PDXDC2PQ6P474 469 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 MRC2Q9UBG0 1479 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 SMARCA2P51531 1590 aa6.39□□□□□ -1.39
DHX40-204ENST00000577549 PSDA5PKW4 1024 aaPredicted RBP6.38□□□□□ -1.39
DHX40-204ENST00000577549 PTPRNQ16849 979 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 Q3C1V9 767 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 DMRTA1Q5VZB9 504 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 CARD14Q9BXL6 1004 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 ACBD3Q9H3P7 528 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 PRKAG2Q9UGJ0 569 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 PARP2Q9UGN5 583 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 STAU1O95793 577 aaKnown RBP6.38□□□□□ -1.39
DHX40-204ENST00000577549 FANCCQ00597 558 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 SCUBE3Q8IX30 993 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 THAP11Q96EK4 314 aa6.38□□□□□ -1.39
DHX40-204ENST00000577549 ACTN4O43707 911 aaKnown RBP6.37□□□□□ -1.39
DHX40-204ENST00000577549 MPSTP25325 297 aa6.37□□□□□ -1.39
DHX40-204ENST00000577549 DUSP9Q99956 384 aaKnown RBP6.37□□□□□ -1.39
DHX40-204ENST00000577549 PRDM9Q9NQV7 894 aa6.37□□□□□ -1.39
DHX40-204ENST00000577549 MAPK8P45983 427 aa6.37□□□□□ -1.39
DHX40-204ENST00000577549 SAP130Q9H0E3 1048 aa6.37□□□□□ -1.39
DHX40-204ENST00000577549 GPSM3Q9Y4H4 160 aa6.37□□□□□ -1.39
DHX40-204ENST00000577549 TREHO43280 583 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 JUNDP17535 347 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
DHX40-204ENST00000577549 SF3B2Q13435 895 aaKnown RBP6.36□□□□□ -1.39
DHX40-204ENST00000577549 ARHGAP9Q9BRR9 750 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 PIF1Q9H611 641 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 IQSEC2Q5JU85 1478 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 MAGEB6P1A0A0J9YX57 407 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 FMR1Q06787 632 aaKnown RBP eCLIP6.36□□□□□ -1.39
DHX40-204ENST00000577549 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
DHX40-204ENST00000577549 EVA1BQ9NVM1 165 aa6.36□□□□□ -1.39
DHX40-204ENST00000577549 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
DHX40-204ENST00000577549 KMT5BQ4FZB7 885 aa6.35□□□□□ -1.39
DHX40-204ENST00000577549 RBCK1Q9BYM8 510 aa6.35□□□□□ -1.39
DHX40-204ENST00000577549 TTBK1Q5TCY1 1321 aaPredicted RBP6.35□□□□□ -1.39
DHX40-204ENST00000577549 IGHA2P01877 340 aa6.35□□□□□ -1.39
DHX40-204ENST00000577549 NOP9Q86U38 636 aaKnown RBP6.35□□□□□ -1.39
DHX40-204ENST00000577549 HELQQ8TDG4 1101 aa6.35□□□□□ -1.39
DHX40-204ENST00000577549 CUEDC1Q9NWM3 386 aaPredicted RBP6.35□□□□□ -1.39
DHX40-204ENST00000577549 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 CCNYL3P0C7X3 344 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 SLC4A3P48751 1232 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 ZBTB33Q86T24 672 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 TMC1Q8TDI8 760 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
DHX40-204ENST00000577549 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 NPR3P17342 541 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 DNAJA1P31689 397 aaKnown RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 MCCD1P59942 119 aaPredicted RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 PTCRAQ6ISU1 281 aaPredicted RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 DZIP3Q86Y13 1208 aaKnown RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 ZFRQ96KR1 1074 aaKnown RBP6.34□□□□□ -1.39
DHX40-204ENST00000577549 NUDT12Q9BQG2 462 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 PDS5BQ9NTI5 1447 aa6.34□□□□□ -1.39
DHX40-204ENST00000577549 XPCQ01831 940 aaPredicted RBP6.33□□□□□ -1.4
DHX40-204ENST00000577549 DSC3Q14574 896 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 SH3BP5LQ7L8J4 393 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 GPATCH3Q96I76 525 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 GPR182O15218 404 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 FAM160A2Q8N612 972 aaPredicted RBP6.33□□□□□ -1.4
DHX40-204ENST00000577549 SLC43A3Q8NBI5 491 aa6.33□□□□□ -1.4
DHX40-204ENST00000577549 EHHADHQ08426 723 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 FAM26DQ5JW98 314 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 NLGN1Q8N2Q7 840 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 ZNF592Q92610 1267 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
DHX40-204ENST00000577549 KIF21AQ7Z4S6 1674 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms