RNA–Protein interactions for RNA: ENST00000577549.1

DHX40-204, Transcript of DEAH-box helicase 40, humanhuman

TSL 2

Gene DHX40, Length 2,654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-204ENST00000577549 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
DHX40-204ENST00000577549 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
DHX40-204ENST00000577549 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
DHX40-204ENST00000577549 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
DHX40-204ENST00000577549 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
DHX40-204ENST00000577549 SENP3Q9H4L4 574 aaPredicted RBP11.2□□□□□ -0.62
DHX40-204ENST00000577549 KCNA4P22459 653 aa11.09□□□□□ -0.63
DHX40-204ENST00000577549 ADRA2BP18089 450 aa11.06□□□□□ -0.64
DHX40-204ENST00000577549 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
DHX40-204ENST00000577549 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
DHX40-204ENST00000577549 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
DHX40-204ENST00000577549 FOXD1Q16676 465 aa10.47□□□□□ -0.73
DHX40-204ENST00000577549 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
DHX40-204ENST00000577549 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
DHX40-204ENST00000577549 ZBTB22O15209 634 aa10.29□□□□□ -0.76
DHX40-204ENST00000577549 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
DHX40-204ENST00000577549 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
DHX40-204ENST00000577549 NCBP3Q53F19 620 aaKnown RBP10.11□□□□□ -0.79
DHX40-204ENST00000577549 PIAS4Q8N2W9 510 aaPredicted RBP10.02□□□□□ -0.81
DHX40-204ENST00000577549 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
DHX40-204ENST00000577549 FOXD4L1Q9NU39 408 aa9.81□□□□□ -0.84
DHX40-204ENST00000577549 CNKSR2Q8WXI2 1034 aa9.79□□□□□ -0.84
DHX40-204ENST00000577549 FKBP8Q14318 412 aa9.66□□□□□ -0.86
DHX40-204ENST00000577549 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
DHX40-204ENST00000577549 DNAJC5BQ9UF47 199 aa9.59□□□□□ -0.87
DHX40-204ENST00000577549 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
DHX40-204ENST00000577549 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
DHX40-204ENST00000577549 RNF216Q9NWF9 866 aaPredicted RBP9.41□□□□□ -0.9
DHX40-204ENST00000577549 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
DHX40-204ENST00000577549 ATXN8OSP0DMR3 200 aa9.28□□□□□ -0.92
DHX40-204ENST00000577549 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
DHX40-204ENST00000577549 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
DHX40-204ENST00000577549 ATF5Q9Y2D1 282 aaPredicted RBP9.22□□□□□ -0.93
DHX40-204ENST00000577549 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
DHX40-204ENST00000577549 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
DHX40-204ENST00000577549 MSH5O43196 834 aa9.14□□□□□ -0.95
DHX40-204ENST00000577549 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
DHX40-204ENST00000577549 DMRT2Q9Y5R5 561 aa9.1□□□□□ -0.95
DHX40-204ENST00000577549 BCANQ96GW7 911 aa9.08□□□□□ -0.96
DHX40-204ENST00000577549 DCAF8L2P0C7V8 631 aa9.04□□□□□ -0.96
DHX40-204ENST00000577549 TPRNQ4KMQ1 711 aa9□□□□□ -0.97
DHX40-204ENST00000577549 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
DHX40-204ENST00000577549 FBLN2P98095 1184 aa8.95□□□□□ -0.98
DHX40-204ENST00000577549 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
DHX40-204ENST00000577549 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
DHX40-204ENST00000577549 PKD2Q13563 968 aa8.92□□□□□ -0.98
DHX40-204ENST00000577549 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
DHX40-204ENST00000577549 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
DHX40-204ENST00000577549 SPDYE4A6NLX3 237 aa8.86□□□□□ -0.99
DHX40-204ENST00000577549 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
DHX40-204ENST00000577549 U3KPZ7 1027 aaPredicted RBP8.81□□□□□ -1
DHX40-204ENST00000577549 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
DHX40-204ENST00000577549 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
DHX40-204ENST00000577549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -13e-6■□□□□ 9
DHX40-204ENST00000577549 ZNF219Q9P2Y4 722 aaPredicted RBP8.79□□□□□ -1
DHX40-204ENST00000577549 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
DHX40-204ENST00000577549 PROM2Q8N271 834 aa8.78□□□□□ -1
DHX40-204ENST00000577549 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
DHX40-204ENST00000577549 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
DHX40-204ENST00000577549 CFAP44Q96MT7 982 aa8.77□□□□□ -1.01
DHX40-204ENST00000577549 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
DHX40-204ENST00000577549 TSHZ2Q9NRE2 1034 aa8.72□□□□□ -1.01
DHX40-204ENST00000577549 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
DHX40-204ENST00000577549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
DHX40-204ENST00000577549 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
DHX40-204ENST00000577549 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.69□□□□□ -1.02
DHX40-204ENST00000577549 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
DHX40-204ENST00000577549 RGL2O15211 777 aa8.63□□□□□ -1.03
DHX40-204ENST00000577549 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
DHX40-204ENST00000577549 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
DHX40-204ENST00000577549 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
DHX40-204ENST00000577549 ARXQ96QS3 562 aa8.57□□□□□ -1.04
DHX40-204ENST00000577549 KLHL34Q8N239 644 aa8.56□□□□□ -1.04
DHX40-204ENST00000577549 SPOCK2Q92563 424 aa8.53□□□□□ -1.04
DHX40-204ENST00000577549 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
DHX40-204ENST00000577549 NBR1Q14596 966 aa8.5□□□□□ -1.05
DHX40-204ENST00000577549 CHGAP10645 457 aaKnown RBP8.5□□□□□ -1.05
DHX40-204ENST00000577549 POTEDQ86YR6 584 aa8.49□□□□□ -1.05
DHX40-204ENST00000577549 POLA2Q14181 598 aa8.46□□□□□ -1.06
DHX40-204ENST00000577549 TRHP20396 242 aaPredicted RBP8.43□□□□□ -1.06
DHX40-204ENST00000577549 SPINK5Q9NQ38 1064 aaPredicted RBP8.43□□□□□ -1.06
DHX40-204ENST00000577549 TMEM132AQ24JP5 1023 aa8.41□□□□□ -1.06
DHX40-204ENST00000577549 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
DHX40-204ENST00000577549 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
DHX40-204ENST00000577549 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
DHX40-204ENST00000577549 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
DHX40-204ENST00000577549 APLP2Q06481 763 aa8.34□□□□□ -1.07
DHX40-204ENST00000577549 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
DHX40-204ENST00000577549 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
DHX40-204ENST00000577549 MIER1Q8N108 512 aa8.32□□□□□ -1.08
DHX40-204ENST00000577549 C14orf37Q86TY3 774 aa8.31□□□□□ -1.08
DHX40-204ENST00000577549 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
DHX40-204ENST00000577549 GTPBP6O43824 516 aaPredicted RBP8.26□□□□□ -1.09
DHX40-204ENST00000577549 ABCB7O75027 752 aa8.25□□□□□ -1.09
DHX40-204ENST00000577549 STAG3Q9UJ98 1225 aa8.25□□□□□ -1.09
DHX40-204ENST00000577549 CAPN15O75808 1086 aa8.24□□□□□ -1.09
DHX40-204ENST00000577549 ZNF692Q9BU19 519 aaPredicted RBP8.24□□□□□ -1.09
DHX40-204ENST00000577549 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
DHX40-204ENST00000577549 PABPN1Q86U42 306 aaKnown RBP eCLIP8.19□□□□□ -1.1
DHX40-204ENST00000577549 OSCARQ8IYS5 282 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms