RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
C12orf56-205ENST00000542397 BANK1Q8NDB2 785 aa8.56□□□□□ -1.04
C12orf56-205ENST00000542397 PRDM2Q13029 1718 aa8.56□□□□□ -1.04
C12orf56-205ENST00000542397 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
C12orf56-205ENST00000542397 TOPBP1Q92547 1522 aa8.55□□□□□ -1.04
C12orf56-205ENST00000542397 H3BM21 787 aa8.55□□□□□ -1.04
C12orf56-205ENST00000542397 VEGFBP49765 207 aa8.55□□□□□ -1.04
C12orf56-205ENST00000542397 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
C12orf56-205ENST00000542397 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
C12orf56-205ENST00000542397 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
C12orf56-205ENST00000542397 ESPNB1AK53 854 aa8.53□□□□□ -1.04
C12orf56-205ENST00000542397 SOCS7O14512 581 aa8.53□□□□□ -1.04
C12orf56-205ENST00000542397 IRF7Q92985 503 aa8.53□□□□□ -1.04
C12orf56-205ENST00000542397 GAPVD1Q14C86 1478 aa8.52□□□□□ -1.05
C12orf56-205ENST00000542397 TARBP1Q13395 1621 aaKnown RBP8.52□□□□□ -1.05
C12orf56-205ENST00000542397 RAB15P59190 212 aa8.52□□□□□ -1.05
C12orf56-205ENST00000542397 TMPRSS4Q9NRS4 437 aa8.52□□□□□ -1.05
C12orf56-205ENST00000542397 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
C12orf56-205ENST00000542397 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 TTLL8A6PVC2 850 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 SPINT1O43278 529 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 FBXO45P0C2W1 286 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 FLIIQ13045 1269 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 ERCC6L2Q5T890 1561 aa8.51□□□□□ -1.05
C12orf56-205ENST00000542397 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 SYNJ1O43426 1573 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
C12orf56-205ENST00000542397 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
C12orf56-205ENST00000542397 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 PCDHB9Q9Y5E1 797 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 ERBB4Q15303 1308 aa8.5□□□□□ -1.05
C12orf56-205ENST00000542397 GMPRP36959 345 aa8.49□□□□□ -1.05
C12orf56-205ENST00000542397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
C12orf56-205ENST00000542397 AGBL1Q96MI9 1066 aa8.49□□□□□ -1.05
C12orf56-205ENST00000542397 SNRKQ9NRH2 765 aa8.49□□□□□ -1.05
C12orf56-205ENST00000542397 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 APBB1O00213 710 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 LILRA1O75019 489 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 RELBQ01201 579 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 NR1H3Q13133 447 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
C12orf56-205ENST00000542397 RAD54L2Q9Y4B4 1467 aa8.47□□□□□ -1.05
C12orf56-205ENST00000542397 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
C12orf56-205ENST00000542397 GPR37L1O60883 481 aa8.47□□□□□ -1.05
C12orf56-205ENST00000542397 TDRD9Q8NDG6 1382 aaKnown RBP8.47□□□□□ -1.05
C12orf56-205ENST00000542397 PPFIA3O75145 1194 aa8.46□□□□□ -1.06
C12orf56-205ENST00000542397 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
C12orf56-205ENST00000542397 ADH1AP07327 375 aa8.46□□□□□ -1.06
C12orf56-205ENST00000542397 VSIG8P0DPA2 414 aa8.46□□□□□ -1.06
C12orf56-205ENST00000542397 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
C12orf56-205ENST00000542397 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
C12orf56-205ENST00000542397 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
C12orf56-205ENST00000542397 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
C12orf56-205ENST00000542397 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
C12orf56-205ENST00000542397 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
C12orf56-205ENST00000542397 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
C12orf56-205ENST00000542397 ZNF592Q92610 1267 aa8.45□□□□□ -1.06
C12orf56-205ENST00000542397 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
C12orf56-205ENST00000542397 KRTAP4-8Q9BYQ9 185 aa8.45□□□□□ -1.06
C12orf56-205ENST00000542397 ZNF395Q9H8N7 513 aaPredicted RBP8.45□□□□□ -1.06
C12orf56-205ENST00000542397 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
C12orf56-205ENST00000542397 PTSQ03393 145 aa8.44□□□□□ -1.06
C12orf56-205ENST00000542397 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
C12orf56-205ENST00000542397 CYLDQ9NQC7 956 aa8.44□□□□□ -1.06
C12orf56-205ENST00000542397 POLA1P09884 1462 aaPredicted RBP8.44□□□□□ -1.06
C12orf56-205ENST00000542397 KDM6BO15054 1643 aa8.43□□□□□ -1.06
C12orf56-205ENST00000542397 TSPOAP1O95153 1857 aa8.43□□□□□ -1.06
C12orf56-205ENST00000542397 PTGIRP43119 386 aa8.43□□□□□ -1.06
C12orf56-205ENST00000542397 XP32Q5T750 250 aa8.43□□□□□ -1.06
C12orf56-205ENST00000542397 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
C12orf56-205ENST00000542397 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
C12orf56-205ENST00000542397 CHMP7Q8WUX9 453 aaPredicted RBP8.43□□□□□ -1.06
C12orf56-205ENST00000542397 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
C12orf56-205ENST00000542397 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
C12orf56-205ENST00000542397 LMTK3Q96Q04 1460 aa8.4□□□□□ -1.06
C12orf56-205ENST00000542397 A6NJR5 290 aa8.4□□□□□ -1.06
C12orf56-205ENST00000542397 ADGRL1O94910 1474 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 SLC35F4A4IF30 521 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
C12orf56-205ENST00000542397 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 PRM3Q9NNZ6 103 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 TBC1D2BQ9UPU7 963 aa8.39□□□□□ -1.07
C12orf56-205ENST00000542397 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
C12orf56-205ENST00000542397 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
C12orf56-205ENST00000542397 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
C12orf56-205ENST00000542397 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
C12orf56-205ENST00000542397 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
C12orf56-205ENST00000542397 SYNJ2O15056 1496 aa8.37□□□□□ -1.07
C12orf56-205ENST00000542397 RNF144AP50876 292 aaPredicted RBP8.36□□□□□ -1.07
C12orf56-205ENST00000542397 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
C12orf56-205ENST00000542397 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
C12orf56-205ENST00000542397 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
C12orf56-205ENST00000542397 CEP170Q5SW79 1584 aa8.35□□□□□ -1.07
C12orf56-205ENST00000542397 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
C12orf56-205ENST00000542397 ITGA6P23229 1130 aa8.35□□□□□ -1.07
C12orf56-205ENST00000542397 SCTRP47872 440 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms