RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
C12orf56-205ENST00000542397 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
C12orf56-205ENST00000542397 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
C12orf56-205ENST00000542397 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
C12orf56-205ENST00000542397 POTEDQ86YR6 584 aa20.47■□□□□ 0.87
C12orf56-205ENST00000542397 FOXD1Q16676 465 aa19.84■□□□□ 0.77
C12orf56-205ENST00000542397 MSH5O43196 834 aa19.11■□□□□ 0.65
C12orf56-205ENST00000542397 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
C12orf56-205ENST00000542397 PIAS4Q8N2W9 510 aaPredicted RBP18.3■□□□□ 0.52
C12orf56-205ENST00000542397 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
C12orf56-205ENST00000542397 ADRA2BP18089 450 aa18.19■□□□□ 0.5
C12orf56-205ENST00000542397 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
C12orf56-205ENST00000542397 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
C12orf56-205ENST00000542397 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
C12orf56-205ENST00000542397 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
C12orf56-205ENST00000542397 PPP4R3CPQ6ZMV5 832 aa16.53■□□□□ 0.24
C12orf56-205ENST00000542397 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
C12orf56-205ENST00000542397 RNF39Q9H2S5 420 aa16.15■□□□□ 0.18
C12orf56-205ENST00000542397 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
C12orf56-205ENST00000542397 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
C12orf56-205ENST00000542397 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
C12orf56-205ENST00000542397 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
C12orf56-205ENST00000542397 C1QBPQ07021 282 aaKnown RBP15.89■□□□□ 0.13
C12orf56-205ENST00000542397 POTEHQ6S545 545 aa15.84■□□□□ 0.13
C12orf56-205ENST00000542397 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
C12orf56-205ENST00000542397 KCNA4P22459 653 aa15.69■□□□□ 0.1
C12orf56-205ENST00000542397 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
C12orf56-205ENST00000542397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
C12orf56-205ENST00000542397 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
C12orf56-205ENST00000542397 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
C12orf56-205ENST00000542397 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
C12orf56-205ENST00000542397 DSG3P32926 999 aa14.72□□□□□ -0.05
C12orf56-205ENST00000542397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.63□□□□□ -0.07
C12orf56-205ENST00000542397 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
C12orf56-205ENST00000542397 SPINK5Q9NQ38 1064 aaPredicted RBP14.63□□□□□ -0.07
C12orf56-205ENST00000542397 CAPN15O75808 1086 aa14.6□□□□□ -0.07
C12orf56-205ENST00000542397 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
C12orf56-205ENST00000542397 APLP2Q06481 763 aa14.57□□□□□ -0.08
C12orf56-205ENST00000542397 FOXD4L1Q9NU39 408 aa14.57□□□□□ -0.08
C12orf56-205ENST00000542397 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
C12orf56-205ENST00000542397 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
C12orf56-205ENST00000542397 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
C12orf56-205ENST00000542397 ZBTB22O15209 634 aa14.42□□□□□ -0.1
C12orf56-205ENST00000542397 SP7Q8TDD2 431 aaPredicted RBP14.33□□□□□ -0.12
C12orf56-205ENST00000542397 ABCB7O75027 752 aa14.28□□□□□ -0.12
C12orf56-205ENST00000542397 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
C12orf56-205ENST00000542397 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
C12orf56-205ENST00000542397 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
C12orf56-205ENST00000542397 POLA2Q14181 598 aa14.11□□□□□ -0.15
C12orf56-205ENST00000542397 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
C12orf56-205ENST00000542397 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
C12orf56-205ENST00000542397 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
C12orf56-205ENST00000542397 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
C12orf56-205ENST00000542397 HAX1O00165 279 aa13.71□□□□□ -0.21
C12orf56-205ENST00000542397 FBLN2P98095 1184 aa13.64□□□□□ -0.23
C12orf56-205ENST00000542397 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
C12orf56-205ENST00000542397 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
C12orf56-205ENST00000542397 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
C12orf56-205ENST00000542397 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
C12orf56-205ENST00000542397 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
C12orf56-205ENST00000542397 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
C12orf56-205ENST00000542397 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
C12orf56-205ENST00000542397 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
C12orf56-205ENST00000542397 LHX8Q68G74 356 aa13.42□□□□□ -0.26
C12orf56-205ENST00000542397 REM2Q8IYK8 340 aaPredicted RBP13.4□□□□□ -0.26
C12orf56-205ENST00000542397 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
C12orf56-205ENST00000542397 EVX2Q03828 476 aa13.37□□□□□ -0.27
C12orf56-205ENST00000542397 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
C12orf56-205ENST00000542397 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
C12orf56-205ENST00000542397 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
C12orf56-205ENST00000542397 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
C12orf56-205ENST00000542397 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
C12orf56-205ENST00000542397 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
C12orf56-205ENST00000542397 SPDYE4A6NLX3 237 aa13.07□□□□□ -0.32
C12orf56-205ENST00000542397 GABBR2O75899 941 aa13.07□□□□□ -0.32
C12orf56-205ENST00000542397 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
C12orf56-205ENST00000542397 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
C12orf56-205ENST00000542397 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
C12orf56-205ENST00000542397 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
C12orf56-205ENST00000542397 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
C12orf56-205ENST00000542397 PROM2Q8N271 834 aa12.8□□□□□ -0.36
C12orf56-205ENST00000542397 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
C12orf56-205ENST00000542397 FKBP8Q14318 412 aa12.7□□□□□ -0.38
C12orf56-205ENST00000542397 POTEMA6NI47 508 aa12.69□□□□□ -0.38
C12orf56-205ENST00000542397 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
C12orf56-205ENST00000542397 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
C12orf56-205ENST00000542397 PCDH10Q9P2E7 1040 aa12.63□□□□□ -0.39
C12orf56-205ENST00000542397 CLCN6P51797 869 aa12.62□□□□□ -0.39
C12orf56-205ENST00000542397 POTEGQ6S5H5 508 aa12.62□□□□□ -0.39
C12orf56-205ENST00000542397 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
C12orf56-205ENST00000542397 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
C12orf56-205ENST00000542397 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
C12orf56-205ENST00000542397 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
C12orf56-205ENST00000542397 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
C12orf56-205ENST00000542397 MIER1Q8N108 512 aa12.44□□□□□ -0.42
C12orf56-205ENST00000542397 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
C12orf56-205ENST00000542397 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
C12orf56-205ENST00000542397 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
C12orf56-205ENST00000542397 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
C12orf56-205ENST00000542397 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms