RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Unc13bQ9Z1N9 1602 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Slc35g1Q8BY79 368 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Kif2cQ922S8 721 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Prim1P20664 417 aa12.77□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Aifm3Q3TY86 605 aa12.77□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Tmem2Q5FWI3 1383 aa12.77□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Myo5bP21271 1818 aa12.77□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Tns3Q5SSZ5 1440 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 MyclP10166 368 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Ggnbp2Q5SV77 696 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Ccne1Q61457 408 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Cog6Q8R3I3 657 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Nfat5Q9WV30 1534 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Ncapd2Q8K2Z4 1392 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Hsp90aa1P07901 733 aaKnown RBP12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Tm6sf1P58749 370 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Rab11fip3Q8CHD8 1047 aa12.76□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Wdr63B2RY71 923 aa12.75□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Snap23O09044 210 aa12.75□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 KnstrnQ9D9Z1 312 aaKnown RBP12.75□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Rtf1A2AQ19 715 aaKnown RBP12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Tnpo1Q8BFY9 898 aaKnown RBP12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Aldh8a1Q8BH00 487 aa12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Foxp4Q9DBY0 795 aaKnown RBP12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 CarsQ9ER72 831 aaKnown RBP12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Aplp1Q03157 653 aa12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Ncoa4Q5U4H9 625 aa12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Pdlim2Q8R1G6 349 aa12.74□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Mfap1aC0HKD8 439 aaKnown RBP12.73□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Mfap1bC0HKD9 439 aaKnown RBP12.73□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Nup153E9Q3G8 1462 aaKnown RBP12.73□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 HnrnpuQ8VEK3 800 aaKnown RBP12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 HypkQ9CR41 129 aa12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 1700019A02RikA0A087WPV9 146 aa12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Nid2O88322 1403 aa12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Cgnl1Q6AW69 1298 aa12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Tmem132eQ6IEE6 982 aa12.72□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Fam13aQ8BGI4 693 aa12.71□□□□□ -0.37
Cpsf3-211ENSMUST00000222968 Scn4aQ9ER60 1841 aa12.71□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Pibf1E9Q6K3 756 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Atf5O70191 283 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Siglec1Q62230 1695 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Gli3Q61602 1583 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Phlpp1Q8CHE4 1687 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Dlg5E9Q9R9 1921 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Eif4g2Q62448 906 aaKnown RBP12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Ccdc9Q8VC31 543 aaKnown RBP12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Gcc1Q9D4H2 778 aa12.7□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Nrxn3Q6P9K9 1571 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Kdm6aO70546 1401 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Triml2E9PW10 424 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Prkar2bP31324 416 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Sv2bQ8BG39 683 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Pnpla7A2AJ88 1352 aa12.69□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Gm10093D3YYI8 482 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Hdac1O09106 482 aaKnown RBP12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Tbc1d9Q3UYK3 1264 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Gimap6Q8K349 305 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 FanclQ9CR14 375 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Wdr17E9Q271 1322 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Wnk3Q80XP9 1757 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Mcm2P97310 904 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Gsdma3Q5Y4Y6 464 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Cyp2d12Q8BVD2 504 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Amotl1Q9D4H4 968 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 TimelessQ9R1X4 1197 aa12.68□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Fam83gQ5SWY7 812 aa12.67□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 CenppQ9CZ92 286 aa12.67□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Fyb1O35601 819 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Kcnh5Q920E3 988 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Abcc12Q80WJ6 1366 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Anapc15-psA0A140T8L6 141 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Terf2O35144 541 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 TatQ8QZR1 454 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Nek4Q9Z1J2 792 aa12.65□□□□□ -0.38
Cpsf3-211ENSMUST00000222968 Disp3A3KFU9 1347 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Atg4a-psA0A0G2JFS9 396 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Catsper2A2ARP9 588 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 ArxO35085 564 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Q3TQI7 289 aaKnown RBP12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Htatsf1Q8BGC0 757 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Atg4aQ8C9S8 396 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Amotl2Q8K371 772 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Bcl11aQ9QYE3 773 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 BcorQ8CGN4 1759 aa12.64□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Chpf2Q3UU43 768 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Antxr1Q9CZ52 562 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Ccdc146E9Q9F7 977 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 DaxxO35613 739 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Fgd1P52734 960 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Ppp1r37Q8BKR5 712 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Dnajc10Q9DC23 793 aa12.63□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 ScaperF8VQ70 1398 aaKnown RBP12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Col18a1P39061 1774 aa12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Cnksr1A2A9K7 700 aa12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Smarca5Q91ZW3 1051 aaKnown RBP12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Aox2Q5SGK3 1345 aa12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Stk36Q69ZM6 1316 aa12.62□□□□□ -0.39
Cpsf3-211ENSMUST00000222968 Gnai2P08752 355 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms