RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Rtn4Q99P72 1162 aaKnown RBP16.67■□□□□ 0.26
Clcn4-203ENSMUST00000210061 PtmaP26350 111 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Phf23Q8BSN5 401 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Itsn1Q9Z0R4 1714 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Atg4a-psA0A0G2JFS9 396 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Tpm2P58774 284 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Atg4aQ8C9S8 396 aa16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Kif20bQ80WE4 1774 aaKnown RBP16.66■□□□□ 0.26
Clcn4-203ENSMUST00000210061 4931400O07RikQ9D4M5 137 aa16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Erich6bQ9D4S6 220 aa16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Cyp46a1Q9WVK8 500 aa16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 1700019A02RikA0A087WPV9 146 aa16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Zdhhc9P59268 364 aa16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Mrps27Q8BK72 415 aaKnown RBP16.65■□□□□ 0.26
Clcn4-203ENSMUST00000210061 Mdc1Q5PSV9 1707 aa16.64■□□□□ 0.26
Clcn4-203ENSMUST00000210061 4930407I10RikD3Z5T8 1512 aa16.64■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Erc2Q6PH08 957 aa16.64■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Q9D2X8 372 aa16.64■□□□□ 0.25
Clcn4-203ENSMUST00000210061 PtpruB1AUH1 1446 aa16.64■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Eif4a2P10630 407 aa16.63■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Gm9992B2RWK3 458 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Unc93aQ710D3 458 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Pdcl2Q78Y63 240 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Asxl2Q8BZ32 1370 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Cdk12Q14AX6 1484 aaKnown RBP16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Rnf123Q5XPI3 1314 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Zkscan16A2ALW2 728 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 MpripP97434 1024 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Afap1Q80YS6 731 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Rsph4aQ8BYM7 716 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Fez1Q8K0X8 392 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 NpatQ8BMA5 1420 aa16.62■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Gdpd2Q9ESM6 539 aa16.61■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Adgrb1Q3UHD1 1582 aa16.61■□□□□ 0.25
Clcn4-203ENSMUST00000210061 VgfQ0VGU4 617 aa16.6■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Ap3b2Q9JME5 1082 aa16.6■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Ush1cQ9ES64 910 aa16.59■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Tex2Q6ZPJ0 1128 aaKnown RBP16.59■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Gemin5Q8BX17 1502 aaKnown RBP16.59■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Pibf1E9Q6K3 756 aa16.58■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Vwa3bJ9JI28 736 aa16.58■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Bcar3Q9QZK2 820 aa16.58■□□□□ 0.25
Clcn4-203ENSMUST00000210061 Zfp777B9EKF4 885 aa16.58■□□□□ 0.24
Clcn4-203ENSMUST00000210061 NexnQ7TPW1 607 aa16.58■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Dip2aQ8BWT5 1523 aa16.58■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Zkscan2G3X952 960 aa16.57■□□□□ 0.24
Clcn4-203ENSMUST00000210061 TmpoQ61033 693 aaKnown RBP16.57■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gm156Q58A37 223 aa16.57■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Zc3h13E9Q784 1729 aaKnown RBP16.57■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Syce3B5KM66 88 aa16.56■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Ggnbp2Q5SV77 696 aa16.56■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Chd4Q6PDQ2 1915 aaKnown RBP16.56■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Sv2bQ8BG39 683 aa16.56■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Glipr1l2Q9CQ35 332 aa16.56■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Erbb4Q61527 1308 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gm45015A0A140LII9 184 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gm18336A0A140LIU8 765 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 RestQ8VIG1 1082 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 LlphQ9D945 130 aaKnown RBP16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Becn1O88597 448 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Pdia4P08003 638 aaKnown RBP16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gadd45bP22339 160 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Pabpn1Q8CCS6 302 aaKnown RBP16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Cc2d1aQ8K1A6 943 aa16.55■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Frmpd2A0A140LI67 1392 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 CalcaP70160 136 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Taok2Q6ZQ29 1240 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 AnlnQ8K298 1121 aaKnown RBP16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gripap1Q8VD04 806 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Ripk4Q9ERK0 786 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Tet3Q8BG87 1668 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gnai2P08752 355 aaKnown RBP16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Prune1Q8BIW1 454 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Nphp1Q9QY53 687 aa16.54■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Ercc6l2Q9JIM3 1537 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Astn2Q80Z10 1352 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Kif4P33174 1231 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Kdm4aQ8BW72 1064 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Med1Q925J9 1575 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Gse1Q3U3C9 1213 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Nol8Q3UHX0 1147 aaKnown RBP16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Ptpdc1Q6NZK8 747 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Filip1lQ6P6L0 1131 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Srgap3Q812A2 1099 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Rcan3Q9JKK0 239 aa16.53■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Rtf1A2AQ19 715 aaKnown RBP16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Zscan25B2RX31 543 aa16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 MccE9PWI3 1003 aa16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Prim1P20664 417 aa16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Atp6v1dP57746 247 aa16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 Psme1P97371 249 aa16.52■□□□□ 0.24
Clcn4-203ENSMUST00000210061 St18Q80TY4 1045 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Mknk2Q8CDB0 459 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Rbm10Q99KG3 930 aaKnown RBP16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Cps1Q8C196 1500 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Phactr2B1AVP0 632 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Hmox1P14901 289 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Anapc15P60007 132 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Rbm27Q5SFM8 1060 aaKnown RBP16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Plppr3Q7TPB0 716 aa16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms