RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 C3P01027 1663 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Fkbp4P30416 458 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Kcna6Q61923 529 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Kif20bQ80WE4 1774 aaKnown RBP12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Kif18aQ91WD7 886 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Med1Q925J9 1575 aa12.3□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Cavin2Q63918 418 aaKnown RBP12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 HnrnpuQ8VEK3 800 aaKnown RBP12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 N4bp2F8VQG7 1678 aaKnown RBP12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Cog6Q8R3I3 657 aa12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Fam50bQ9WTJ8 334 aa12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Chl1P70232 1209 aa12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Ccdc155Q80VJ8 648 aa12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Nol11Q8BJW5 723 aaKnown RBP12.29□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Acsbg1Q99PU5 721 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Btbd11Q6GQW0 1109 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Amotl1Q9D4H4 968 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 KnstrnQ9D9Z1 312 aaKnown RBP12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Col16a1Q8BLX7 1580 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Prkar2bP31324 416 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 MarsQ68FL6 902 aaKnown RBP12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 TkfcQ8VC30 578 aa12.28□□□□□ -0.44
Rnf41-202ENSMUST00000171342 D430041D05RikF6ZGR6 1678 aa12.27□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Pik3c2aQ61194 1686 aa12.27□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Camta1A2A891 1682 aa12.27□□□□□ -0.44
Rnf41-202ENSMUST00000171342 Rad17Q6NXW6 688 aa12.27□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Spef2Q8C9J3 1734 aa12.27□□□□□ -0.45
Rnf41-202ENSMUST00000171342 C5P06684 1680 aa12.27□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Eif4g2Q62448 906 aaKnown RBP12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 OptnQ8K3K8 584 aa12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Sart3Q9JLI8 962 aaKnown RBP12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Kif24Q6NWW5 1356 aa12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 CarsQ9ER72 831 aaKnown RBP12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Chmp7Q8R1T1 451 aa12.26□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Ccdc27Q3V036 639 aa12.25□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Smarca5Q91ZW3 1051 aaKnown RBP12.25□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Foxp4Q9DBY0 795 aaKnown RBP12.25□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Zmym3Q9JLM4 1370 aa12.25□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Als2Q920R0 1651 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Lmtk3Q5XJV6 1424 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Trim27Q62158 513 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 GorabQ8BRM2 368 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Cyp2d12Q8BVD2 504 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Col14a1Q80X19 1797 aa12.24□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Hs1bp3Q3TC93 395 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 CrklP47941 303 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Arhgef1Q61210 920 aaKnown RBP12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 FanclQ9CR14 375 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Txnrd1Q9JMH6 613 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Phlpp2Q8BXA7 1320 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Rimbp3Q3V0F0 1606 aa12.23□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Exoc6bA6H5Z3 810 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Fam13aQ8BGI4 693 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Ppp1r37Q8BKR5 712 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Sipa1l2Q80TE4 1722 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Brd1E9PZ26 1189 aaKnown RBP12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Nkx1-2P42580 305 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Map3k13Q1HKZ5 959 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 NalcnQ8BXR5 1738 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 HdgfP51859 237 aaKnown RBP12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Amigo3Q8C2S7 508 aa12.22□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Cfdp1O88271 295 aaKnown RBP12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 ThemisQ8BGW0 636 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Cetn4Q8K4K1 168 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Nek4Q9Z1J2 792 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 TnrQ8BYI9 1358 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Mon2Q80TL7 1715 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Nrxn3Q6P9K9 1571 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Kdm6aO70546 1401 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Gnai2P08752 355 aaKnown RBP12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Wwc1Q5SXA9 1104 aa12.21□□□□□ -0.45
Rnf41-202ENSMUST00000171342 Alpk3Q924C5 1678 aa12.21□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Srgap3Q812A2 1099 aa12.21□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Eif4a1P60843 406 aaKnown RBP12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Speer4bQ9D9F7 267 aa12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Map2P20357 1828 aa12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 DaxxO35613 739 aa12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Cwc27Q3TKY6 469 aa12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Mphosph10Q810V0 681 aaKnown RBP12.2□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Atf5O70191 283 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Nkx2-3P97334 362 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Slc4a10Q5DTL9 1118 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Scaf1Q5U4C3 1256 aaKnown RBP12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Zpr1Q62384 459 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Ubr1O70481 1757 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Card10P58660 1021 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Tnpo1Q8BFY9 898 aaKnown RBP12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Aldh1l2Q8K009 923 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Cgnl1Q6AW69 1298 aa12.19□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Cyb5rlB1AS42 316 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Wdr63B2RY71 923 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Zap70P43404 618 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Ppp1r42Q8R1Z4 357 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Pdzd9Q9D9M4 266 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 LifrP42703 1092 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Cnnm1Q0GA42 951 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Igsf1Q7TQA1 1317 aa12.18□□□□□ -0.46
Rnf41-202ENSMUST00000171342 PsapQ61207 557 aaKnown RBP12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm21663A0A0G2JE01 267 aa12.17□□□□□ -0.46
Rnf41-202ENSMUST00000171342 Gm7361D3Z6R1 267 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms