RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 1700019A02RikA0A087WPV9 146 aa19.47■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Triml2E9PW10 424 aa19.47■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Zfp777B9EKF4 885 aa19.47■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Ggnbp2Q5SV77 696 aa19.47■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Safb2Q80YR5 991 aaKnown RBP19.47■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Idi1P58044 227 aa19.46■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Fam13aQ8BGI4 693 aa19.46■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Gcc1Q9D4H2 778 aa19.46■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Dennd6aQ8BH65 605 aa19.46■□□□□ 0.71
Sdc1-205ENSMUST00000171158 Ccdc146E9Q9F7 977 aa19.45■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Nlgn1Q99K10 843 aa19.45■□□□□ 0.7
Sdc1-205ENSMUST00000171158 FanclQ9CR14 375 aa19.45■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Tfip11Q9ERA6 838 aaKnown RBP19.44■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Pibf1E9Q6K3 756 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Prim1P20664 417 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Eya1P97767 591 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Sox12Q04890 314 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Nsfl1cQ9CZ44 370 aaKnown RBP19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 CenppQ9CZ92 286 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Mcm2P97310 904 aa19.43■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Frmpd2A0A140LI67 1392 aa19.42■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Anapc15-psA0A140T8L6 141 aa19.42■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Rtf1A2AQ19 715 aaKnown RBP19.42■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Prkar2bP31324 416 aa19.42■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Msh6P54276 1358 aaKnown RBP19.41■□□□□ 0.7
Sdc1-205ENSMUST00000171158 GorabQ8BRM2 368 aa19.41■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Lmtk3Q5XJV6 1424 aa19.41■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Snap23O09044 210 aa19.41■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Nckap5lQ6GQX2 1323 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Igsf1Q7TQA1 1317 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Fgd1P52734 960 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Kdm4cQ8VCD7 1054 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Cabp4Q8VHC5 271 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Gm21190A0A0G2JGJ6 266 aa19.4■□□□□ 0.7
Sdc1-205ENSMUST00000171158 Gm10563F6WIE4 79 aa19.39■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Rfx1P48377 963 aa19.39■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ahnak2E9PYB0 1738 aaKnown RBP19.39■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ssh1Q76I79 1042 aa19.39■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Sv2bQ8BG39 683 aa19.38■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Arfgef2A2A5R2 1792 aa19.38■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Rad17Q6NXW6 688 aa19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Plppr3Q7TPB0 716 aa19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Smarca5Q91ZW3 1051 aaKnown RBP19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ddit3P35639 168 aa19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ccne1Q61457 408 aa19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ap3b2Q9JME5 1082 aa19.37■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Rsph3aQ3UFY4 516 aa19.36■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ppp6r3Q922D4 844 aa19.36■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Atg4a-psA0A0G2JFS9 396 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Hoxc9P09633 260 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Mcm4P49717 862 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 EngaseQ8BX80 734 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Atg4aQ8C9S8 396 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Myo5bP21271 1818 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 1700010I14RikQ7TPG0 532 aa19.35■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Spryd3E9Q9B3 442 aa19.34■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Nucb1Q02819 459 aaKnown RBP19.34■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Pdia3P27773 505 aaKnown RBP19.34■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Ppip5k2Q6ZQB6 1129 aa19.34■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Foxp4Q9DBY0 795 aaKnown RBP19.34■□□□□ 0.69
Sdc1-205ENSMUST00000171158 Fam83gQ5SWY7 812 aa19.33■□□□□ 0.69
Sdc1-205ENSMUST00000171158 4933402E13RikQ9D4D2 429 aa19.32■□□□□ 0.68
Sdc1-205ENSMUST00000171158 C3P01027 1663 aa19.32■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.31■□□□□ 0.68
Sdc1-205ENSMUST00000171158 HypkQ9CR41 129 aa19.31■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Cyp46a1Q9WVK8 500 aa19.31■□□□□ 0.68
Sdc1-205ENSMUST00000171158 ScaperF8VQ70 1398 aaKnown RBP19.3■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Tmem94Q7TSH8 1360 aa19.3■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Q3TQI7 289 aaKnown RBP19.3■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Ano8Q6PB70 1060 aa19.3■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Plcb2A3KGF7 1181 aa19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Robo1O89026 1612 aa19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Bcl9Q9D219 1425 aa19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Elp1Q7TT37 1333 aaKnown RBP19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Gnai2P08752 355 aaKnown RBP19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Scaf1Q5U4C3 1256 aaKnown RBP19.29■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Atf5O70191 283 aa19.28■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Slc35g1Q8BY79 368 aa19.28■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Cc2d1aQ8K1A6 943 aa19.28■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Tmem132eQ6IEE6 982 aa19.27■□□□□ 0.68
Sdc1-205ENSMUST00000171158 Pnpla7A2AJ88 1352 aa19.27■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Dmrtc1Q9D9R7 182 aa19.26■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Dlg5E9Q9R9 1921 aa19.26■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Casq1O09165 405 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Cyp2d12Q8BVD2 504 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Nphp1Q9QY53 687 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Disp3A3KFU9 1347 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Chpf2Q3UU43 768 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Srgap3Q812A2 1099 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Ppp1r42Q8R1Z4 357 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Stk36Q69ZM6 1316 aa19.25■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Q9D2X8 372 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Bcar3Q9QZK2 820 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Nup153E9Q3G8 1462 aaKnown RBP19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Rnf123Q5XPI3 1314 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Nfat5Q9WV30 1534 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Mmp8O70138 465 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Sipa1l2Q80TE4 1722 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Alpk3Q924C5 1678 aa19.24■□□□□ 0.67
Sdc1-205ENSMUST00000171158 Gsdma3Q5Y4Y6 464 aa19.23■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms