RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Rhox13F6YCR7 232 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Nos2P29477 1144 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 LpoQ5SW46 710 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Fbxo45Q8K3B1 286 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Hhipl2Q9D2G9 717 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Iqcf3Q9D498 203 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 RereQ80TZ9 1558 aa8.39□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Foxj1Q61660 421 aa8.38□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Galntl5Q9D4M9 431 aa8.38□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 3425401B19RikD3Z1D3 1412 aa8.38□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Eid3Q3V124 375 aa8.38□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Dennd4bQ3U1Y4 1499 aa8.38□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Kiaa1551Q5DTW7 1521 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Tie1Q06806 1134 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 PsdQ5DTT2 1024 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Fut2Q9JL27 347 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Lekr1B2RVN1 116 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Ccer2J3QPU5 274 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Wdhd1P59328 1117 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Slc27a5Q4LDG0 689 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Wdr43Q6ZQL4 677 aaKnown RBP8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 TbceQ8CIV8 524 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Speer4f1Q9D5Q6 258 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Gpc1Q9QZF2 557 aa8.37□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Ttll12Q3UDE2 639 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Pnma5Q5DTT8 618 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Mak16Q8BGS0 296 aaKnown RBP8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 5730596B20RikQ8BQ08 205 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Irx5Q9JKQ4 484 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Myom2Q14BI5 1463 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Dip2aQ8BWT5 1523 aa8.36□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 EgflamQ4VBE4 1017 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Msh5Q9QUM7 833 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Scn4aQ9ER60 1841 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Sema3fO88632 785 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Eif4g2Q62448 906 aaKnown RBP8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Pip4k2bQ80XI4 416 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Phf14Q9D4H9 881 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 4930407I10RikD3Z5T8 1512 aa8.35□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Ptk2P34152 1090 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Nek1P51954 1203 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Sh3bp1P55194 680 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Chmp3Q9CQ10 224 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Ssr1Q9CY50 286 aaKnown RBP8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Ms4a4cQ9D3F6 226 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Cspp1B2RX88 1205 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Hsp90b1P08113 802 aaKnown RBP8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Tpm2P58774 284 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Fam13aQ8BGI4 693 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Arhgef40Q3UPH7 1517 aa8.34□□□□□ -1.07
Ccdc38-203ENSMUST00000132214 Abca6Q8K441 1624 aa8.34□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Hap1O35668 628 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Atp6v1aP50516 617 aaKnown RBP8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Fhdc1Q3ULZ2 1149 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Liat1Q810M6 228 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Ccnb3Q810T2 1396 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Kidins220E9Q9B7 1793 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cul4bA2A432 970 aaKnown RBP8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Rasa1E9PYG6 1038 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Atp9bP98195 1146 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Klra4Q60651 263 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Sik2Q8CFH6 931 aa8.33□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cfap74Q3UY96 1578 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 NexmifQ5DTT1 1515 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 DaxxO35613 739 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Dpp9Q8BVG4 862 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Morc2bQ8C5W4 1022 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Pcdhgc3Q91XX1 934 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cdc42bpaQ3UU96 1719 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Trappc8E9PWG2 1437 aa8.32□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Afap1Q80YS6 731 aa8.31□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Map2k7Q8CE90 535 aa8.31□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Pdlim2Q8R1G6 349 aa8.31□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Lmtk2Q3TYD6 1471 aa8.31□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Topaz1E5FYH1 1653 aa8.31□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Abcc3B2RX12 1523 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Dip2bQ3UH60 1574 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Mmp14P53690 582 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Tmed8Q3UHI4 326 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Zpr1Q62384 459 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 SrrtQ99MR6 875 aaKnown RBP8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Fhad1A6PWD2 1420 aa8.3□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Tdrd9Q14BI7 1383 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Mia2Q91ZV0 1396 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Ncoa4Q5U4H9 625 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Chic2Q9D9G3 165 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Hecw1Q8K4P8 1604 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cfap65Q3V0B4 1847 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Iqsec2Q5DU25 1478 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 1700017N19RikA0A087WPJ1 469 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Flt3Q00342 1000 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Rrp12Q6P5B0 1295 aaKnown RBP8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Lrrc46Q9DAP0 323 aa8.29□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Trpm2Q91YD4 1506 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Gm32742A0A1B0GT42 1604 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Ncoa1P70365 1447 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Vps8Q0P5W1 1427 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Rbm27Q5SFM8 1060 aaKnown RBP8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Npas4Q8BGD7 802 aa8.28□□□□□ -1.08
Ccdc38-203ENSMUST00000132214 Cwc22Q8C5N3 908 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms