Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm25239-201ENSMUST00000174915 86 ntBASIC42,05■■■■■ 4,32
Npas4Q8BGD7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,97■■■■□ 3,83
Npas4Q8BGD7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38,43■■■■□ 3,74
Npas4Q8BGD7 Gm15042-201ENSMUST00000120212 883 ntBASIC36,58■■■■□ 3,45
Npas4Q8BGD7 Gm24109-201ENSMUST00000175489 103 ntBASIC36,51■■■■□ 3,44
Npas4Q8BGD7 Gm15045-201ENSMUST00000117359 883 ntBASIC35,72■■■■□ 3,31
Npas4Q8BGD7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35,57■■■■□ 3,28
Npas4Q8BGD7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,52■■■■□ 3,28
Npas4Q8BGD7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,42■■■■□ 3,26
Npas4Q8BGD7 Gm23366-201ENSMUST00000175022 89 ntBASIC35,12■■■■□ 3,21
Npas4Q8BGD7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,96■■■■□ 3,19
Npas4Q8BGD7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Npas4Q8BGD7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,5■■■■□ 3,11
Npas4Q8BGD7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,15■■■■□ 3,06
Npas4Q8BGD7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34,11■■■■□ 3,05
Npas4Q8BGD7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,88■■■■□ 3,01
Npas4Q8BGD7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,83■■■■□ 3,01
Npas4Q8BGD7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,82■■■■□ 3
Npas4Q8BGD7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,79■■■■□ 3
Npas4Q8BGD7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Npas4Q8BGD7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,48■■■□□ 2,95
Npas4Q8BGD7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33,38■■■□□ 2,93
Npas4Q8BGD7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33,37■■■□□ 2,93
Npas4Q8BGD7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,34■■■□□ 2,93
Npas4Q8BGD7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33,32■■■□□ 2,92
Npas4Q8BGD7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,31■■■□□ 2,92
Npas4Q8BGD7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33,29■■■□□ 2,92
Npas4Q8BGD7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33,26■■■□□ 2,92
Npas4Q8BGD7 Gm25238-201ENSMUST00000174914 89 ntBASIC33,24■■■□□ 2,91
Npas4Q8BGD7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33,08■■■□□ 2,89
Npas4Q8BGD7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,93■■■□□ 2,86
Npas4Q8BGD7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,89■■■□□ 2,86
Npas4Q8BGD7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,72■■■□□ 2,83
Npas4Q8BGD7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,64■■■□□ 2,82
Npas4Q8BGD7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Npas4Q8BGD7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,42■■■□□ 2,78
Npas4Q8BGD7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,41■■■□□ 2,78
Npas4Q8BGD7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,33■■■□□ 2,77
Npas4Q8BGD7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Npas4Q8BGD7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,26■■■□□ 2,76
Npas4Q8BGD7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,25■■■□□ 2,75
Npas4Q8BGD7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32,23■■■□□ 2,75
Npas4Q8BGD7 Psd-208ENSMUST00000224556 2034 ntBASIC32,02■■■□□ 2,72
Npas4Q8BGD7 Gm27325-201ENSMUST00000175467 74 ntBASIC32,02■■■□□ 2,72
Npas4Q8BGD7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,02■■■□□ 2,72
Npas4Q8BGD7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,97■■■□□ 2,71
Npas4Q8BGD7 Gm25262-201ENSMUST00000174934 133 ntBASIC31,96■■■□□ 2,71
Npas4Q8BGD7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Npas4Q8BGD7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Npas4Q8BGD7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,61■■■□□ 2,65
Npas4Q8BGD7 Rab21-202ENSMUST00000218831 843 ntBASIC31,58■■■□□ 2,65
Npas4Q8BGD7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Npas4Q8BGD7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,51■■■□□ 2,63
Npas4Q8BGD7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,5■■■□□ 2,63
Npas4Q8BGD7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,46■■■□□ 2,63
Npas4Q8BGD7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,41■■■□□ 2,62
Npas4Q8BGD7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Npas4Q8BGD7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,38■■■□□ 2,61
Npas4Q8BGD7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,34■■■□□ 2,61
Npas4Q8BGD7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,3■■■□□ 2,6
Npas4Q8BGD7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Npas4Q8BGD7 Gm26115-201ENSMUST00000175605 87 ntBASIC31,24■■■□□ 2,59
Npas4Q8BGD7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31,17■■■□□ 2,58
Npas4Q8BGD7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
Npas4Q8BGD7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,15■■■□□ 2,58
Npas4Q8BGD7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Npas4Q8BGD7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,11■■■□□ 2,57
Npas4Q8BGD7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Npas4Q8BGD7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31,08■■■□□ 2,57
Npas4Q8BGD7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,07■■■□□ 2,56
Npas4Q8BGD7 Gm8109-201ENSMUST00000194076 746 ntBASIC31,02■■■□□ 2,56
Npas4Q8BGD7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31■■■□□ 2,55
Npas4Q8BGD7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,98■■■□□ 2,55
Npas4Q8BGD7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,97■■■□□ 2,55
Npas4Q8BGD7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Npas4Q8BGD7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Npas4Q8BGD7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Npas4Q8BGD7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Npas4Q8BGD7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Npas4Q8BGD7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,84■■■□□ 2,53
Npas4Q8BGD7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,74■■■□□ 2,51
Npas4Q8BGD7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,73■■■□□ 2,51
Npas4Q8BGD7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,72■■■□□ 2,51
Npas4Q8BGD7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,72■■■□□ 2,51
Npas4Q8BGD7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,68■■■□□ 2,5
Npas4Q8BGD7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,64■■■□□ 2,5
Npas4Q8BGD7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,61■■■□□ 2,49
Npas4Q8BGD7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Npas4Q8BGD7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,51■■■□□ 2,47
Npas4Q8BGD7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,49■■■□□ 2,47
Npas4Q8BGD7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Npas4Q8BGD7 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,47■■■□□ 2,47
Npas4Q8BGD7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Npas4Q8BGD7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30,42■■■□□ 2,46
Npas4Q8BGD7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,41■■■□□ 2,46
Npas4Q8BGD7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,45
Npas4Q8BGD7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Npas4Q8BGD7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Npas4Q8BGD7 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,3■■■□□ 2,44
Npas4Q8BGD7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms