RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Gm21698A0A087WQP8 267 aa32,75■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Gm21671G3UY31 267 aa32,75■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Rlbp1Q9Z275 317 aa32,75■■■□□ 2,83
Tpm1-216ENSMUST00000113707 MarsQ68FL6 902 aaKnown RBP32,74■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Ppp1r37Q8BKR5 712 aa32,74■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Card10P58660 1021 aa32,73■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Bcl9lQ67FY2 1494 aa32,72■■■□□ 2,83
Tpm1-216ENSMUST00000113707 1700019A02RikA0A087WPV9 146 aa32,72■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Chl1P70232 1209 aa32,72■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Abca15E9PWH4 1668 aa32,72■■■□□ 2,83
Tpm1-216ENSMUST00000113707 TkfcQ8VC30 578 aa32,71■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Myo5bP21271 1818 aa32,71■■■□□ 2,83
Tpm1-216ENSMUST00000113707 B4galnt3Q6L8S8 986 aa32,71■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Foxp4Q9DBY0 795 aaKnown RBP32,71■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Simc1E9Q6E9 1354 aa32,7■■■□□ 2,83
Tpm1-216ENSMUST00000113707 Chmp4bQ9D8B3 224 aaKnown RBP32,69■■■□□ 2,82
Tpm1-216ENSMUST00000113707 MvpQ9EQK5 861 aa32,69■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Col15a1O35206 1367 aa32,69■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Abcc12Q80WJ6 1366 aa32,68■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Nutm1Q8BHP2 1126 aa32,67■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Dbr1Q923B1 550 aa32,67■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Pibf1E9Q6K3 756 aa32,67■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Ankrd44B2RXR6 993 aa32,66■■■□□ 2,82
Tpm1-216ENSMUST00000113707 OptnQ8K3K8 584 aa32,66■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Ric3Q8BPM6 367 aa32,65■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Kif24Q6NWW5 1356 aa32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Atp10bB1AWN4 1474 aa32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 CrklP47941 303 aa32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Hs1bp3Q3TC93 395 aa32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Cadps2Q8BYR5 1297 aa32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Msh6P54276 1358 aaKnown RBP32,64■■■□□ 2,82
Tpm1-216ENSMUST00000113707 Gm10471E9Q1C7 252 aa32,62■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Atl3Q91YH5 541 aa32,62■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Aox2Q5SGK3 1345 aa32,61■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Q3TQI7 289 aaKnown RBP32,59■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Pak3Q61036 559 aa32,59■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Cyb5rlB1AS42 316 aa32,59■■■□□ 2,81
Tpm1-216ENSMUST00000113707 Atf5O70191 283 aa32,57■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Armcx1Q9CX83 456 aa32,55■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Sv2bQ8BG39 683 aa32,54■■■□□ 2,8
Tpm1-216ENSMUST00000113707 ZgpatQ8VDM1 511 aa32,54■■■□□ 2,8
Tpm1-216ENSMUST00000113707 FocadA2AKG8 1798 aa32,54■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Slit1Q80TR4 1531 aa32,54■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Egfem1Q8C088 590 aa32,53■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Aldh1l2Q8K009 923 aa32,53■■■□□ 2,8
Tpm1-216ENSMUST00000113707 HdgfP51859 237 aaKnown RBP32,52■■■□□ 2,8
Tpm1-216ENSMUST00000113707 ThemisQ8BGW0 636 aa32,52■■■□□ 2,8
Tpm1-216ENSMUST00000113707 Aifm3Q3TY86 605 aa32,51■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Cluap1Q8R3P7 413 aa32,51■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Chpf2Q3UU43 768 aa32,5■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Zranb3Q6NZP1 1069 aa32,5■■■□□ 2,79
Tpm1-216ENSMUST00000113707 AU019823E9PUQ3 292 aa32,48■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Cyp2d12Q8BVD2 504 aa32,48■■■□□ 2,79
Tpm1-216ENSMUST00000113707 RgmbQ7TQ33 436 aa32,47■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Eif4a1P60843 406 aaKnown RBP32,46■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Dlg5E9Q9R9 1921 aa32,46■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Plekhd1B2RPU2 505 aa32,46■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Tnks1bp1P58871 1720 aa32,45■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Btbd11Q6GQW0 1109 aa32,45■■■□□ 2,79
Tpm1-216ENSMUST00000113707 Aplp1Q03157 653 aa32,44■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Txnrd1Q9JMH6 613 aa32,44■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Pdzd9Q9D9M4 266 aa32,44■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Tns2Q8CGB6 1400 aa32,42■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Fam83gQ5SWY7 812 aa32,42■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Phf23Q8BSN5 401 aa32,42■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Nkx2-3P97334 362 aa32,41■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Wwc1Q5SXA9 1104 aa32,41■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Col1a2Q01149 1372 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Cdhr2E9Q7P9 1308 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Ppp2r3aB2RXC8 1150 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 4930572O03RikQ8C5Y0 211 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Phkg2Q9DB30 406 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Cnksr1A2A9K7 700 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Tnnt1O88346 262 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 SkilQ60665 675 aa32,4■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Zfp142G5E869 1843 aa32,39■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Slx1bQ8BX32 270 aa32,39■■■□□ 2,78
Tpm1-216ENSMUST00000113707 Pnpla7A2AJ88 1352 aa32,38■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Chmp7Q8R1T1 451 aa32,37■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Marf1Q8BJ34 1730 aaKnown RBP32,37■■■□□ 2,77
Tpm1-216ENSMUST00000113707 HnrnpuQ8VEK3 800 aaKnown RBP32,37■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Zpr1Q62384 459 aa32,35■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Fgd1P52734 960 aa32,34■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Arhgef1Q61210 920 aaKnown RBP32,34■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Cc2d1aQ8K1A6 943 aa32,33■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Tm6sf1P58749 370 aa32,33■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Acsbg1Q99PU5 721 aa32,33■■■□□ 2,77
Tpm1-216ENSMUST00000113707 Fam50bQ9WTJ8 334 aa32,33■■■□□ 2,77
Tpm1-216ENSMUST00000113707 BcorQ8CGN4 1759 aa32,32■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Irx6Q9ER75 438 aa32,32■■■□□ 2,76
Tpm1-216ENSMUST00000113707 CoilQ5SU73 570 aa32,31■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Gimap5Q8BWF2 308 aa32,31■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Disp3A3KFU9 1347 aa32,31■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Trim27Q62158 513 aa32,3■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Ssfa2Q922B9 1252 aa32,3■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Trim30dE9PWL0 497 aa32,29■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Map7O88735 730 aa32,29■■■□□ 2,76
Tpm1-216ENSMUST00000113707 PsapQ61207 557 aaKnown RBP32,29■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Ccdc155Q80VJ8 648 aa32,29■■■□□ 2,76
Tpm1-216ENSMUST00000113707 Prkar2bP31324 416 aa32,29■■■□□ 2,76
Retrieved 100 of 22,080 RNA–protein pairs in 10,4 ms