RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 Arfgef2A2A5R2 1792 aa27.72■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Swt1Q9DBQ9 907 aa27.72■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Gsdma3Q5Y4Y6 464 aa27.71■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Anks4bQ8K3X6 423 aa27.71■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 Ccdc30Q8BVF4 654 aa27.7■■■□□ 2.03
Snrnp40-201ENSMUST00000105994 HypkQ9CR41 129 aa27.69■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 GakQ99KY4 1305 aa27.69■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Sik1Q60670 779 aa27.69■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Cabp2Q9JLK4 216 aa27.69■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Gm10471E9Q1C7 252 aa27.68■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Neurod2Q62414 383 aa27.68■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Cc2d1aQ8K1A6 943 aa27.68■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Ahnak2E9PYB0 1738 aaKnown RBP27.67■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Ildr2B5TVM2 661 aa27.66■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Exoc5Q3TPX4 708 aa27.66■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Plin1Q8CGN5 517 aa27.66■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Adgrb1Q3UHD1 1582 aa27.65■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Ppp1r37Q8BKR5 712 aa27.65■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Kcnh4A2A5F7 1018 aa27.65■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 TmpoQ61033 693 aaKnown RBP27.65■■■□□ 2.02
Snrnp40-201ENSMUST00000105994 Zcrb1Q9CZ96 217 aaKnown RBP27.64■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Atxn3Q9CVD2 355 aa27.61■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Amotl1Q9D4H4 968 aa27.61■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Ttc41Q692V3 1318 aa27.61■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Lrit1Q8K099 624 aa27.6■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Kank1E9Q238 1360 aa27.59■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Fam50bQ9WTJ8 334 aa27.59■■■□□ 2.01
Snrnp40-201ENSMUST00000105994 Kdm2bQ6P1G2 1309 aa27.58■■■□□ 2
Snrnp40-201ENSMUST00000105994 GalcP54818 684 aa27.57■■■□□ 2
Snrnp40-201ENSMUST00000105994 Ppfibp2O35711 882 aa27.56■■■□□ 2
Snrnp40-201ENSMUST00000105994 OscarQ8VBT3 265 aa27.56■■■□□ 2
Snrnp40-201ENSMUST00000105994 Plekhh1Q80TI1 1356 aa27.56■■■□□ 2
Snrnp40-201ENSMUST00000105994 Upf2A2AT37 1269 aaKnown RBP27.56■■■□□ 2
Snrnp40-201ENSMUST00000105994 Aplp2Q06335 707 aa27.56■■■□□ 2
Snrnp40-201ENSMUST00000105994 Elp1Q7TT37 1333 aaKnown RBP27.55■■■□□ 2
Snrnp40-201ENSMUST00000105994 Larp1bA0A0A6YXJ7 370 aaKnown RBP27.55■■■□□ 2
Snrnp40-201ENSMUST00000105994 Eif5bQ05D44 1216 aaKnown RBP27.55■■■□□ 2
Snrnp40-201ENSMUST00000105994 Tnnt3Q9QZ47 272 aa27.55■■■□□ 2
Snrnp40-201ENSMUST00000105994 Myo5bP21271 1818 aa27.54■■■□□ 2
Snrnp40-201ENSMUST00000105994 Ttc21aQ8C0S4 1314 aa27.54■■■□□ 2
Snrnp40-201ENSMUST00000105994 Ankrd50F7BE84 1390 aa27.53■■■□□ 2
Snrnp40-201ENSMUST00000105994 L3mbtl2P59178 703 aa27.52■■■□□ 2
Snrnp40-201ENSMUST00000105994 ThemisQ8BGW0 636 aa27.52■■■□□ 2
Snrnp40-201ENSMUST00000105994 VirmaA2AIV2 1811 aaKnown RBP27.51■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Gm21680A0A0G2JGR8 267 aa27.51■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Rtf1A2AQ19 715 aaKnown RBP27.51■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Apba2P98084 750 aa27.51■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Bsdc1Q80Y55 427 aa27.51■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Gnai1B2RSH2 354 aa27.49■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 4930572O03RikQ8C5Y0 211 aa27.49■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Gnai3Q9DC51 354 aa27.49■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Vars2Q3U2A8 1060 aa27.48■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Speer4bQ9D9F7 267 aa27.48■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Pnpla7A2AJ88 1352 aa27.47■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Tns2Q8CGB6 1400 aa27.47■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Abcc12Q80WJ6 1366 aa27.47■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Nsd3Q6P2L6 1439 aa27.47■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 NudcO35685 332 aaKnown RBP27.46■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Ksr2Q3UVC0 959 aa27.46■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Aox2Q5SGK3 1345 aa27.46■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Erbb3Q61526 1339 aa27.46■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Sos1Q62245 1319 aa27.46■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Gas2l2Q5SSG4 860 aa27.45■■□□□ 1.99
Snrnp40-201ENSMUST00000105994 Arhgap33Q80YF9 1305 aa27.44■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Ccar1Q8CH18 1146 aaKnown RBP27.44■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Cdc37l1Q9CZP7 335 aa27.44■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Rbm25B2RY56 838 aaKnown RBP27.43■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Afg3l2Q8JZQ2 802 aaKnown RBP27.43■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Snapc4Q8BP86 1333 aa27.42■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Snap23O09044 210 aa27.39■■□□□ 1.98
Snrnp40-201ENSMUST00000105994 Larp1Q6ZQ58 1072 aaKnown RBP27.39■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 CastP51125 788 aa27.38■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Abca3Q8R420 1704 aa27.37■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 PappaQ8R4K8 1624 aa27.37■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Phkg2Q9DB30 406 aa27.36■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Eif3bQ8JZQ9 803 aaKnown RBP27.35■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Pdzd9Q9D9M4 266 aa27.35■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Pim2Q62070 370 aa27.34■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Ssfa2Q922B9 1252 aa27.34■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Ccdc171E9Q1U1 1324 aa27.33■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Sos2Q02384 1333 aa27.33■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Ezh2Q61188 746 aaKnown RBP27.33■■□□□ 1.97
Snrnp40-201ENSMUST00000105994 Ggnbp2Q5SV77 696 aa27.32■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Usp16Q99LG0 825 aa27.32■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Shank3Q4ACU6 1730 aa27.32■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Ubr2Q6WKZ8 1755 aa27.32■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Prim1P20664 417 aa27.31■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Chmp7Q8R1T1 451 aa27.31■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Rps6ka4Q9Z2B9 773 aa27.31■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 ApobrQ8VBT6 942 aa27.31■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Rwdd1Q9CQK7 243 aa27.31■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Igsf1Q7TQA1 1317 aa27.3■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 U2surpQ6NV83 1029 aaKnown RBP27.3■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Klhdc4Q921I2 584 aa27.3■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Gm21663A0A0G2JE01 267 aa27.28■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Gm7361D3Z6R1 267 aa27.28■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 5031410I06RikE9Q4E0 267 aa27.28■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Gm1979E9QAN3 267 aa27.28■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Gm5862K7N5V5 267 aa27.28■■□□□ 1.96
Snrnp40-201ENSMUST00000105994 Gm10220K7N660 267 aa27.28■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms