RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 GorabQ8BRM2 368 aa16.38■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Rreb1Q3UH06 1700 aaKnown RBP16.38■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Trim27Q62158 513 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Nlgn1Q99K10 843 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Terf2O35144 541 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Adamtsl3G3UXC7 1706 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Eya1P97767 591 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Cetn4Q8K4K1 168 aa16.37■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Wdr63B2RY71 923 aa16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Chrna2Q91X60 512 aa16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 LifrP42703 1092 aa16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Rab11fip3Q8CHD8 1047 aa16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 HnrnpuQ8VEK3 800 aaKnown RBP16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Kif24Q6NWW5 1356 aa16.36■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Nom1Q3UFM5 854 aaKnown RBP16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Nek4Q9Z1J2 792 aa16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Tmem94Q7TSH8 1360 aa16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 FancaQ9JL70 1439 aa16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Frmpd2A0A140LI67 1392 aa16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Parp14Q2EMV9 1817 aa16.35■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Eif4g2Q62448 906 aaKnown RBP16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Kif2cQ922S8 721 aa16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Irx6Q9ER75 438 aa16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 CemipQ8BI06 1361 aa16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Irf5P56477 497 aa16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Chl1P70232 1209 aa16.34■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Cc2d1aQ8K1A6 943 aa16.33■□□□□ 0.21
Col9a3-201ENSMUST00000103059 Cdk12Q14AX6 1484 aaKnown RBP16.33■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Q3TQI7 289 aaKnown RBP16.33■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Sv2bQ8BG39 683 aa16.33■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Tbc1d9Q3UYK3 1264 aa16.32■□□□□ 0.2
Col9a3-201ENSMUST00000103059 FanclQ9CR14 375 aa16.32■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Tmem132eQ6IEE6 982 aa16.32■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Ddit3P35639 168 aa16.32■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Rbm10Q99KG3 930 aaKnown RBP16.32■□□□□ 0.2
Col9a3-201ENSMUST00000103059 N4bp2F8VQG7 1678 aaKnown RBP16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Dhx16G3X8X0 1044 aaKnown RBP16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Rfx1P48377 963 aa16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Zfp91Q62511 572 aa16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Slc35g1Q8BY79 368 aa16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Smarca5Q91ZW3 1051 aaKnown RBP16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Tfip11Q9ERA6 838 aaKnown RBP16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Abcc10Q8R4P9 1501 aa16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Prkar2bP31324 416 aa16.31■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Tnnt1O88346 262 aa16.3■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Pdia4P08003 638 aaKnown RBP16.3■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Kif20bQ80WE4 1774 aaKnown RBP16.3■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Fam13aQ8BGI4 693 aa16.3■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Ripk4Q9ERK0 786 aa16.3■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Cgnl1Q6AW69 1298 aa16.29■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Hoxc9P09633 260 aa16.28■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Fam83gQ5SWY7 812 aa16.28■□□□□ 0.2
Col9a3-201ENSMUST00000103059 GphnQ8BUV3 769 aaKnown RBP16.28■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Med1Q925J9 1575 aa16.28■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Aldh1l2Q8K009 923 aa16.28■□□□□ 0.2
Col9a3-201ENSMUST00000103059 Pik3c2aQ61194 1686 aa16.27■□□□□ 0.19
Col9a3-201ENSMUST00000103059 IbspQ61711 324 aa16.27■□□□□ 0.19
Col9a3-201ENSMUST00000103059 HypkQ9CR41 129 aa16.27■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Erbb4Q61527 1308 aa16.26■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Aldh8a1Q8BH00 487 aa16.26■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Tm6sf1P58749 370 aa16.26■□□□□ 0.19
Col9a3-201ENSMUST00000103059 VgfQ0VGU4 617 aa16.26■□□□□ 0.19
Col9a3-201ENSMUST00000103059 DekQ7TNV0 380 aaKnown RBP16.26■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Nsfl1cQ9CZ44 370 aaKnown RBP16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Gcc1Q9D4H2 778 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Map2P20357 1828 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 4930407I10RikD3Z5T8 1512 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Gm10093D3YYI8 482 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Hdac1O09106 482 aaKnown RBP16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Camta1A2A891 1682 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Mdc1Q5PSV9 1707 aa16.25■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Rsph3aQ3UFY4 516 aa16.24■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Arap3Q8R5G7 1538 aa16.24■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Ubr1O70481 1757 aa16.23■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Col16a1Q8BLX7 1580 aa16.23■□□□□ 0.19
Col9a3-201ENSMUST00000103059 NalcnQ8BXR5 1738 aa16.23■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Gse1Q3U3C9 1213 aa16.23■□□□□ 0.19
Col9a3-201ENSMUST00000103059 D430041D05RikF6ZGR6 1678 aa16.22■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Stk11ipQ3TAA7 1072 aa16.22■□□□□ 0.19
Col9a3-201ENSMUST00000103059 TatQ8QZR1 454 aa16.22■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Amotl2Q8K371 772 aa16.22■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Chpf2Q3UU43 768 aa16.21■□□□□ 0.19
Col9a3-201ENSMUST00000103059 CenppQ9CZ92 286 aa16.21■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Fyb1O35601 819 aa16.21■□□□□ 0.19
Col9a3-201ENSMUST00000103059 Mcm2P97310 904 aa16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Cyp46a1Q9WVK8 500 aa16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Atg4a-psA0A0G2JFS9 396 aa16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Gnai2P08752 355 aaKnown RBP16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Srgap3Q812A2 1099 aa16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Atg4aQ8C9S8 396 aa16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Foxp4Q9DBY0 795 aaKnown RBP16.2■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Gsdma3Q5Y4Y6 464 aa16.19■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Erich6bQ9D4S6 220 aa16.19■□□□□ 0.18
Col9a3-201ENSMUST00000103059 C5P06684 1680 aa16.19■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Ppip5k2Q6ZQB6 1129 aa16.18■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Pdcl2Q78Y63 240 aa16.18■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Q9D2X8 372 aa16.18■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Phf23Q8BSN5 401 aa16.18■□□□□ 0.18
Col9a3-201ENSMUST00000103059 Ush1cQ9ES64 910 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms