RNA–Protein interactions for RNA: ENSMUST00000103059.1

Col9a3-201, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a3, Length 2,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-201ENSMUST00000103059 NischQ80TM9 1593 aa25.38■■□□□ 1.65
Col9a3-201ENSMUST00000103059 Gm35339A0A140LHH9 1649 aa24.74■■□□□ 1.55
Col9a3-201ENSMUST00000103059 Abcc9P70170 1546 aa24.56■■□□□ 1.52
Col9a3-201ENSMUST00000103059 Abcc8B2RUS7 1588 aa24.06■■□□□ 1.44
Col9a3-201ENSMUST00000103059 Rhox8Q6VSS7 320 aa23.82■■□□□ 1.4
Col9a3-201ENSMUST00000103059 Rtl1Q7M732 1744 aa22.96■■□□□ 1.27
Col9a3-201ENSMUST00000103059 Ccdc180J3QNE4 1664 aa22.62■■□□□ 1.21
Col9a3-201ENSMUST00000103059 ScribQ80U72 1612 aa22.44■■□□□ 1.18
Col9a3-201ENSMUST00000103059 Rpgrip1Q9EPQ2 1331 aa22.32■■□□□ 1.16
Col9a3-201ENSMUST00000103059 Dcaf1Q80TR8 1506 aa22.32■■□□□ 1.16
Col9a3-201ENSMUST00000103059 Rb1cc1Q9ESK9 1588 aa22.24■■□□□ 1.15
Col9a3-201ENSMUST00000103059 Zcchc6Q5BLK4 1491 aaKnown RBP22.22■■□□□ 1.15
Col9a3-201ENSMUST00000103059 Ccdc136Q3TVA9 1136 aa22.1■■□□□ 1.13
Col9a3-201ENSMUST00000103059 Kdm5dQ62240 1548 aa22.07■■□□□ 1.12
Col9a3-201ENSMUST00000103059 Baz1aO88379 1555 aa21.93■■□□□ 1.1
Col9a3-201ENSMUST00000103059 NacadQ5SWP3 1504 aa21.87■■□□□ 1.09
Col9a3-201ENSMUST00000103059 HrcG5E8J6 738 aa21.66■■□□□ 1.06
Col9a3-201ENSMUST00000103059 Acin1Q9JIX8 1338 aaKnown RBP21.6■■□□□ 1.05
Col9a3-201ENSMUST00000103059 Trim41Q5NCC3 630 aa21.49■■□□□ 1.03
Col9a3-201ENSMUST00000103059 Crybg2B7ZCC2 1516 aa21.44■■□□□ 1.02
Col9a3-201ENSMUST00000103059 Ehmt2Q9Z148 1263 aaKnown RBP21.43■■□□□ 1.02
Col9a3-201ENSMUST00000103059 Smarca2Q6DIC0 1577 aa21.41■■□□□ 1.02
Col9a3-201ENSMUST00000103059 Sycp2Q9CUU3 1500 aa21.38■■□□□ 1.01
Col9a3-201ENSMUST00000103059 Pcgf6Q99NA9 353 aa21.23■□□□□ 0.99
Col9a3-201ENSMUST00000103059 Cngb1E1AZ71 1325 aa21.13■□□□□ 0.97
Col9a3-201ENSMUST00000103059 Cecr2E9Q2Z1 1453 aa21.03■□□□□ 0.96
Col9a3-201ENSMUST00000103059 Cep164Q5DU05 1446 aa21.02■□□□□ 0.96
Col9a3-201ENSMUST00000103059 Brd4Q9ESU6 1400 aaKnown RBP21■□□□□ 0.95
Col9a3-201ENSMUST00000103059 Chic1Q8CBW7 227 aa20.91■□□□□ 0.94
Col9a3-201ENSMUST00000103059 BicraF8VPZ9 1578 aa20.91■□□□□ 0.94
Col9a3-201ENSMUST00000103059 Gab3Q8BSM5 595 aa20.89■□□□□ 0.94
Col9a3-201ENSMUST00000103059 Esf1Q3V1V3 845 aaKnown RBP20.86■□□□□ 0.93
Col9a3-201ENSMUST00000103059 Rsf1E9PWW9 1441 aaKnown RBP20.84■□□□□ 0.93
Col9a3-201ENSMUST00000103059 Synj1Q8CHC4 1574 aa20.8■□□□□ 0.92
Col9a3-201ENSMUST00000103059 Golga3P55937 1487 aa20.76■□□□□ 0.91
Col9a3-201ENSMUST00000103059 Ccdc88bQ4QRL3 1481 aa20.72■□□□□ 0.91
Col9a3-201ENSMUST00000103059 CftrP26361 1476 aa20.68■□□□□ 0.9
Col9a3-201ENSMUST00000103059 Supt5hO55201 1082 aaKnown RBP20.61■□□□□ 0.89
Col9a3-201ENSMUST00000103059 Cttnbp2B9EJA2 1648 aa20.5■□□□□ 0.87
Col9a3-201ENSMUST00000103059 Neurod1Q60867 357 aa20.48■□□□□ 0.87
Col9a3-201ENSMUST00000103059 Smarca4Q3TKT4 1613 aaKnown RBP20.47■□□□□ 0.87
Col9a3-201ENSMUST00000103059 Top2bQ64511 1612 aa20.42■□□□□ 0.86
Col9a3-201ENSMUST00000103059 Cc2d2aQ8CFW7 1633 aa20.32■□□□□ 0.84
Col9a3-201ENSMUST00000103059 Las1lA2BE28 776 aaKnown RBP20.3■□□□□ 0.84
Col9a3-201ENSMUST00000103059 Iqgap2Q3UQ44 1575 aa20.22■□□□□ 0.83
Col9a3-201ENSMUST00000103059 Fmn1Q05860 1466 aa20.19■□□□□ 0.82
Col9a3-201ENSMUST00000103059 Myt1lP97500 1187 aa20.16■□□□□ 0.82
Col9a3-201ENSMUST00000103059 Mier1Q5UAK0 511 aa20.15■□□□□ 0.82
Col9a3-201ENSMUST00000103059 Atad2bE9Q166 1460 aaKnown RBP20.12■□□□□ 0.81
Col9a3-201ENSMUST00000103059 Npm2Q80W85 207 aa20.1■□□□□ 0.81
Col9a3-201ENSMUST00000103059 Rapgef2Q8CHG7 1496 aa20.07■□□□□ 0.8
Col9a3-201ENSMUST00000103059 Top2aQ01320 1528 aaKnown RBP20.07■□□□□ 0.8
Col9a3-201ENSMUST00000103059 UbtfP25976 765 aaKnown RBP20.04■□□□□ 0.8
Col9a3-201ENSMUST00000103059 Pds5bQ4VA53 1446 aaKnown RBP20.04■□□□□ 0.8
Col9a3-201ENSMUST00000103059 Zeb1Q64318 1117 aa20.03■□□□□ 0.8
Col9a3-201ENSMUST00000103059 NefmP08553 848 aa20■□□□□ 0.79
Col9a3-201ENSMUST00000103059 Cep162Q6ZQ06 1403 aa19.98■□□□□ 0.79
Col9a3-201ENSMUST00000103059 1700123L14RikQ3V2K7 440 aa19.98■□□□□ 0.79
Col9a3-201ENSMUST00000103059 Il27Q8K3I6 234 aa19.9■□□□□ 0.78
Col9a3-201ENSMUST00000103059 Anks4bQ8K3X6 423 aa19.88■□□□□ 0.77
Col9a3-201ENSMUST00000103059 Frmpd1A2AKB4 1549 aa19.85■□□□□ 0.77
Col9a3-201ENSMUST00000103059 Sall2Q9QX96 1004 aa19.84■□□□□ 0.77
Col9a3-201ENSMUST00000103059 Csrnp3P59055 597 aa19.81■□□□□ 0.76
Col9a3-201ENSMUST00000103059 Myt1Q8CFC2 1127 aa19.79■□□□□ 0.76
Col9a3-201ENSMUST00000103059 Wdr62Q3U3T8 1523 aa19.78■□□□□ 0.76
Col9a3-201ENSMUST00000103059 Clip1Q922J3 1391 aa19.77■□□□□ 0.75
Col9a3-201ENSMUST00000103059 Kif15Q6P9L6 1387 aa19.76■□□□□ 0.75
Col9a3-201ENSMUST00000103059 Plekhg3Q4VAC9 1341 aa19.76■□□□□ 0.75
Col9a3-201ENSMUST00000103059 TnnQ80Z71 1560 aa19.75■□□□□ 0.75
Col9a3-201ENSMUST00000103059 CenpbP27790 599 aa19.75■□□□□ 0.75
Col9a3-201ENSMUST00000103059 Ercc6F8VPZ5 1481 aa19.73■□□□□ 0.75
Col9a3-201ENSMUST00000103059 PtprkP35822 1457 aa19.67■□□□□ 0.74
Col9a3-201ENSMUST00000103059 Lamc3Q9R0B6 1581 aa19.64■□□□□ 0.73
Col9a3-201ENSMUST00000103059 Eif4g1Q6NZJ6 1600 aaKnown RBP19.63■□□□□ 0.73
Col9a3-201ENSMUST00000103059 Ap3b1Q9Z1T1 1105 aa19.63■□□□□ 0.73
Col9a3-201ENSMUST00000103059 Arhgap35Q91YM2 1499 aa19.62■□□□□ 0.73
Col9a3-201ENSMUST00000103059 Aplp2Q06335 707 aa19.6■□□□□ 0.73
Col9a3-201ENSMUST00000103059 Unc13aQ4KUS2 1712 aa19.55■□□□□ 0.72
Col9a3-201ENSMUST00000103059 NrkQ9R0G8 1455 aa19.54■□□□□ 0.72
Col9a3-201ENSMUST00000103059 Wdr66E9Q743 1299 aa19.53■□□□□ 0.72
Col9a3-201ENSMUST00000103059 Camsap1A2AHC3 1581 aa19.53■□□□□ 0.72
Col9a3-201ENSMUST00000103059 Ccdc18Q640L5 1455 aa19.52■□□□□ 0.72
Col9a3-201ENSMUST00000103059 Eea1Q8BL66 1411 aa19.52■□□□□ 0.71
Col9a3-201ENSMUST00000103059 Shroom4Q1W617 1475 aa19.51■□□□□ 0.71
Col9a3-201ENSMUST00000103059 Setd5Q5XJV7 1441 aa19.49■□□□□ 0.71
Col9a3-201ENSMUST00000103059 Ubl4bQ9CQ84 188 aa19.47■□□□□ 0.71
Col9a3-201ENSMUST00000103059 Arap1Q4LDD4 1452 aa19.44■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Cdk11bP24788 784 aaKnown RBP19.44■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Npm1Q61937 292 aaKnown RBP19.44■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Aebp2Q9Z248 504 aaKnown RBP19.44■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Phldb1Q6PDH0 1371 aaKnown RBP19.43■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Grin2bQ01097 1482 aa19.42■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Cux2P70298 1426 aa19.4■□□□□ 0.7
Col9a3-201ENSMUST00000103059 TonslQ6NZL6 1363 aa19.39■□□□□ 0.7
Col9a3-201ENSMUST00000103059 Baz1bQ9Z277 1479 aa19.37■□□□□ 0.69
Col9a3-201ENSMUST00000103059 Nop58Q6DFW4 536 aaKnown RBP19.37■□□□□ 0.69
Col9a3-201ENSMUST00000103059 Map3k1P53349 1493 aa19.36■□□□□ 0.69
Col9a3-201ENSMUST00000103059 Ncapd3Q6ZQK0 1506 aa19.36■□□□□ 0.69
Col9a3-201ENSMUST00000103059 Ppargc1bQ8VHJ7 1014 aa19.36■□□□□ 0.69
Col9a3-201ENSMUST00000103059 Mroh2bQ7M6Y6 1581 aa19.33■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 192.9 ms