RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 IncenpQ9WU62 880 aa13.91□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 IbtkQ6ZPR6 1352 aaKnown RBP13.91□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 ClspnQ80YR7 1315 aa13.9□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 ThemisQ8BGW0 636 aa13.9□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 Speer4bQ9D9F7 267 aa13.9□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 Simc1E9Q6E9 1354 aa13.9□□□□□ -0.18
Ccdc42-202ENSMUST00000102612 Fchsd2Q3USJ8 740 aa13.89□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Plekhg5Q66T02 1073 aa13.89□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Egfem1Q8C088 590 aa13.89□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Aplp2Q06335 707 aa13.88□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Zscan10Q3URR7 782 aa13.88□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 ErfeQ6PGN1 340 aa13.88□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Ppp1r37Q8BKR5 712 aa13.88□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Parp14Q2EMV9 1817 aa13.86□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Zcwpw1Q6IR42 630 aa13.86□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Klc3Q91W40 508 aa13.86□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Emilin1Q99K41 1017 aa13.86□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Abca3Q8R420 1704 aa13.85□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Kdm6aO70546 1401 aa13.85□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 ApobrQ8VBT6 942 aa13.85□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Igsf1Q7TQA1 1317 aa13.85□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 MeiocA2AG06 965 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Rad23bP54728 416 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Rnf180Q3U827 592 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 AcrbpQ3V140 540 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Hirip3Q8BLH7 601 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Mtfr1lQ9CWE0 289 aa13.84□□□□□ -0.19
Ccdc42-202ENSMUST00000102612 Eya1P97767 591 aa13.83□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Larp1Q6ZQ58 1072 aaKnown RBP13.83□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 NppbP40753 121 aa13.82□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Jdp2P97875 163 aa13.82□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Sgip1Q8VD37 806 aa13.82□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Lrp5Q91VN0 1614 aa13.82□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Wdr66E9Q743 1299 aa13.8□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Ccnl1Q52KE7 532 aaKnown RBP13.8□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Eif3bQ8JZQ9 803 aaKnown RBP13.8□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Aebp2Q9Z248 504 aaKnown RBP13.8□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Shank3Q4ACU6 1730 aa13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 PnisrA2AJT4 805 aaKnown RBP13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Eif4a2P10630 407 aa13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Yy1Q00899 414 aa13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 C1qtnf12Q8R2Z0 308 aa13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Gprasp1Q5U4C1 1347 aa13.79□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Magea6O89010 325 aa13.78□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Magea3Q6T340 320 aa13.78□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Ppm1fQ8CGA0 452 aa13.78□□□□□ -0.2
Ccdc42-202ENSMUST00000102612 Bicdl1A0JNT9 577 aa13.77□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 CoblQ5NBX1 1337 aaKnown RBP13.77□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 PappaQ8R4K8 1624 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm21663A0A0G2JE01 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm7361D3Z6R1 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 5031410I06RikE9Q4E0 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm1979E9QAN3 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm5862K7N5V5 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm10220K7N660 267 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Prom2Q3UUY6 835 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Slc5a1Q8C3K6 665 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Col23a1Q8K4G2 532 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Mrps5Q99N87 432 aaKnown RBP13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Hdac6Q9Z2V5 1149 aa13.76□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Trim28Q62318 834 aa13.75□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Znrd1-asQ8R0E5 213 aa13.75□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Zswim8Q3UHH1 1832 aaKnown RBP13.74□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Cald1E9QA15 768 aaKnown RBP13.74□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Msl1Q6PDM1 616 aa13.74□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Usp21Q9QZL6 566 aa13.74□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Tns2Q8CGB6 1400 aa13.73□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Crb1Q8VHS2 1405 aa13.73□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Ppp1r15aP17564 657 aa13.73□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Rapgefl1Q68EF8 662 aa13.73□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Phkg2Q9DB30 406 aa13.73□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Zfp777B9EKF4 885 aa13.72□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gsdma3Q5Y4Y6 464 aa13.72□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Asic4Q7TNS7 539 aa13.72□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Sumf1Q8R0F3 372 aa13.72□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Ssfa2Q922B9 1252 aa13.72□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Spata31d1bE9QA57 1361 aa13.71□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Rsph6aQ8CDR2 708 aa13.71□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Ints5Q8CHT3 1018 aa13.71□□□□□ -0.21
Ccdc42-202ENSMUST00000102612 Gm13023A2A8N2 498 aa13.7□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 MpripP97434 1024 aa13.7□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Jmjd4Q8BFT6 427 aa13.7□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Kcnn1Q9EQR3 537 aa13.7□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Igf2rQ07113 2483 aaKnown RBP13.7□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Gpr162Q3UN16 588 aa13.69□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Atg3Q9CPX6 314 aa13.69□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Pdzd9Q9D9M4 266 aa13.69□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Sned1Q70E20 1403 aa13.69□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Msh6P54276 1358 aaKnown RBP13.69□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Smarcc1P97496 1104 aa13.68□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Chmp7Q8R1T1 451 aa13.68□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Kiaa1107Q80TK0 1369 aa13.68□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Ppp2r1aQ76MZ3 589 aa13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Dcaf5Q80T85 946 aa13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Slc12a5Q91V14 1138 aa13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 HypkQ9CR41 129 aa13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Rnaseh2aQ9CWY8 301 aa13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Tjp1P39447 1745 aaKnown RBP13.67□□□□□ -0.22
Ccdc42-202ENSMUST00000102612 Amotl1Q9D4H4 968 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms