RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Hs1bp3Q3TC93 395 aa15.36■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Cavin2Q63918 418 aaKnown RBP15.36■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Rad17Q6NXW6 688 aa15.35■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Tmem2Q5FWI3 1383 aa15.35■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Ppp2r3aB2RXC8 1150 aa15.35■□□□□ 0.05
Vamp1-203ENSMUST00000100942 IbspQ61711 324 aa15.35■□□□□ 0.05
Vamp1-203ENSMUST00000100942 MarsQ68FL6 902 aaKnown RBP15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Tnpo1Q8BFY9 898 aaKnown RBP15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 MvpQ9EQK5 861 aa15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Robo1O89026 1612 aa15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Hoxc9P09633 260 aa15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Ano8Q6PB70 1060 aa15.34■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Mfap1aC0HKD8 439 aaKnown RBP15.33■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Mfap1bC0HKD9 439 aaKnown RBP15.33■□□□□ 0.05
Vamp1-203ENSMUST00000100942 Ccne1Q61457 408 aa15.33■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Phlpp1Q8CHE4 1687 aa15.33■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ankrd44B2RXR6 993 aa15.33■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Scaf1Q5U4C3 1256 aaKnown RBP15.33■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Rrp12Q6P5B0 1295 aaKnown RBP15.33■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ahnak2E9PYB0 1738 aaKnown RBP15.32■□□□□ 0.04
Vamp1-203ENSMUST00000100942 DekQ7TNV0 380 aaKnown RBP15.32■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Arfgef2A2A5R2 1792 aa15.32■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Nrxn3Q6P9K9 1571 aa15.31■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ncapd2Q8K2Z4 1392 aa15.31■□□□□ 0.04
Vamp1-203ENSMUST00000100942 MlecQ6ZQI3 291 aaKnown RBP15.31■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Nfat5Q9WV30 1534 aa15.31■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Plcb2A3KGF7 1181 aa15.3■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Chl1P70232 1209 aa15.3■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Paxip1Q6NZQ4 1056 aa15.3■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Tmem132eQ6IEE6 982 aa15.3■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Snap23O09044 210 aa15.29■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Tex2Q6ZPJ0 1128 aaKnown RBP15.29■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Kif24Q6NWW5 1356 aa15.29■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ggnbp2Q5SV77 696 aa15.29■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Prim1P20664 417 aa15.28■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ncoa4Q5U4H9 625 aa15.28■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Phlpp2Q8BXA7 1320 aa15.28■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Ric3Q8BPM6 367 aa15.27■□□□□ 0.04
Vamp1-203ENSMUST00000100942 SlkO54988 1233 aa15.27■□□□□ 0.04
Vamp1-203ENSMUST00000100942 Rtf1A2AQ19 715 aaKnown RBP15.27■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Dnajc5P60904 198 aa15.27■□□□□ 0.03
Vamp1-203ENSMUST00000100942 SkilQ60665 675 aa15.27■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Chmp4bQ9D8B3 224 aaKnown RBP15.26■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Siglec1Q62230 1695 aa15.26■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Aifm3Q3TY86 605 aa15.26■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Rab11fip3Q8CHD8 1047 aa15.26■□□□□ 0.03
Vamp1-203ENSMUST00000100942 1700019A02RikA0A087WPV9 146 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Il4rP16382 810 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Aplp1Q03157 653 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Wdr17E9Q271 1322 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Rfx1P48377 963 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Antxr1Q9CZ52 562 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Myo5bP21271 1818 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Fyb1O35601 819 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Gimap6Q8K349 305 aa15.25■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Msh6P54276 1358 aaKnown RBP15.24■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Pibf1E9Q6K3 756 aa15.24■□□□□ 0.03
Vamp1-203ENSMUST00000100942 HypkQ9CR41 129 aa15.24■□□□□ 0.03
Vamp1-203ENSMUST00000100942 TimelessQ9R1X4 1197 aa15.24■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Wnk3Q80XP9 1757 aa15.24■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Igsf1Q7TQA1 1317 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Brd1E9PZ26 1189 aaKnown RBP15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Sptbn5F6UCX4 1208 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Tpm2P58774 284 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Wwc1Q5SXA9 1104 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Slain2Q8CI08 581 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Aldh1l2Q8K009 923 aa15.23■□□□□ 0.03
Vamp1-203ENSMUST00000100942 PogkQ80TC5 607 aa15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Kif18aQ91WD7 886 aa15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 BccipQ9CWI3 316 aa15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Foxp4Q9DBY0 795 aaKnown RBP15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Stk11ipQ3TAA7 1072 aa15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Phf23Q8BSN5 401 aa15.22■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Col18a1P39061 1774 aa15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Map7O88735 730 aa15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Mcm4P49717 862 aa15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Nom1Q3UFM5 854 aaKnown RBP15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Isy1Q69ZQ2 285 aaKnown RBP15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 TatQ8QZR1 454 aa15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Kdm6aO70546 1401 aa15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Nup153E9Q3G8 1462 aaKnown RBP15.21■□□□□ 0.03
Vamp1-203ENSMUST00000100942 Tbc1d32Q3URV1 1296 aa15.21■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Gli3Q61602 1583 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Clcn1Q64347 994 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Kcnh5Q920E3 988 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 LifrP42703 1092 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Gsdma3Q5Y4Y6 464 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Trim27Q62158 513 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Ddrgk1Q80WW9 315 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Nid2O88322 1403 aa15.2■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Amotl2Q8K371 772 aa15.19■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Dnajc10Q9DC23 793 aa15.19■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Ythdc1E9Q5K9 736 aaKnown RBP15.19■□□□□ 0.02
Vamp1-203ENSMUST00000100942 GorabQ8BRM2 368 aa15.19■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Catsper2A2ARP9 588 aa15.18■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Ssh1Q76I79 1042 aa15.18■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Dmrtc1Q9D9R7 182 aa15.18■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Dlg5E9Q9R9 1921 aa15.18■□□□□ 0.02
Vamp1-203ENSMUST00000100942 Tm6sf1P58749 370 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms