RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Pik3c2aQ61194 1686 aa14.21□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Pibf1E9Q6K3 756 aa14.21□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Hsp90b1P08113 802 aaKnown RBP14.21□□□□□ -0.13
Ddx55-201ENSMUST00000071057 CanxP35564 591 aaKnown RBP14.21□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Q3UPC7 1272 aa14.21□□□□□ -0.13
Ddx55-201ENSMUST00000071057 Zcwpw1Q6IR42 630 aa14.21□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Slc35g1Q8BY79 368 aa14.21□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ak7Q9D2H2 614 aa14.21□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Cdk12Q14AX6 1484 aaKnown RBP14.21□□□□□ -0.14
Ddx55-201ENSMUST00000071057 C5P06684 1680 aa14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 AU019823E9PUQ3 292 aa14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 KarsQ99MN1 595 aaKnown RBP14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 CemipQ8BI06 1361 aa14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Pnmal2G3X9N3 661 aa14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 MycnP03966 462 aaKnown RBP14.2□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Med1Q925J9 1575 aa14.19□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Als2Q920R0 1651 aa14.19□□□□□ -0.14
Ddx55-201ENSMUST00000071057 TmpoQ61033 693 aaKnown RBP14.19□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ccne1Q61457 408 aa14.19□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Map2P20357 1828 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ccdc183A2AJB1 534 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Aldh1l1Q8R0Y6 902 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Snap23O09044 210 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Erich4Q3UNU4 136 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ubr1O70481 1757 aa14.18□□□□□ -0.14
Ddx55-201ENSMUST00000071057 NalcnQ8BXR5 1738 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ggnbp2Q5SV77 696 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Eya1P97767 591 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Camta1A2A891 1682 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Col16a1Q8BLX7 1580 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Nkx1-2P42580 305 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ipo8Q7TMY7 1010 aa14.17□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Ppp2r3aB2RXC8 1150 aa14.16□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Mon2Q80TL7 1715 aa14.16□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Tmem132eQ6IEE6 982 aa14.16□□□□□ -0.14
Ddx55-201ENSMUST00000071057 1700017N19RikA0A087WPJ1 469 aa14.15□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.15□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Hsp90ab1P11499 724 aaKnown RBP14.15□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Topaz1E5FYH1 1653 aa14.15□□□□□ -0.14
Ddx55-201ENSMUST00000071057 Aplp1Q03157 653 aa14.15□□□□□ -0.14
Ddx55-201ENSMUST00000071057 C3P01027 1663 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Prim1P20664 417 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Stac3Q8BZ71 360 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Rab11fip3Q8CHD8 1047 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Eif2s2Q99L45 331 aaKnown RBP14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Atl3Q91YH5 541 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 MvpQ9EQK5 861 aa14.14□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Sos1Q62245 1319 aa14.13□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Rtf1A2AQ19 715 aaKnown RBP14.13□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Hoxc9P09633 260 aa14.13□□□□□ -0.15
Ddx55-201ENSMUST00000071057 HomezQ80W88 542 aa14.13□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Dnai1Q8C0M8 701 aa14.13□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Mdc1Q5PSV9 1707 aa14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Psmd1Q3TXS7 953 aa14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Aifm3Q3TY86 605 aa14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Cnksr2Q80YA9 1032 aa14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Ric3Q8BPM6 367 aa14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 SetQ9EQU5 289 aaKnown RBP14.12□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Tns3Q5SSZ5 1440 aa14.11□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Ankrd44B2RXR6 993 aa14.11□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Sart3Q9JLI8 962 aaKnown RBP14.11□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Fam43bA2AM80 330 aa14.11□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Scn7aB1AYL1 1681 aa14.1□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Ppm1gQ61074 542 aa14.1□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Fyb1O35601 819 aa14.1□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Lmtk3Q5XJV6 1424 aa14.09□□□□□ -0.15
Ddx55-201ENSMUST00000071057 SkilQ60665 675 aa14.09□□□□□ -0.15
Ddx55-201ENSMUST00000071057 MarsQ68FL6 902 aaKnown RBP14.09□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Ssr1Q9CY50 286 aaKnown RBP14.09□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Sipa1l2Q80TE4 1722 aa14.09□□□□□ -0.15
Ddx55-201ENSMUST00000071057 Rims2Q9EQZ7 1530 aa14.08□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Col14a1Q80X19 1797 aa14.08□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Cavin2Q63918 418 aaKnown RBP14.08□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Kif24Q6NWW5 1356 aa14.08□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Cyb5rlB1AS42 316 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 PtprvP70289 1705 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 TatQ8QZR1 454 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Kif18aQ91WD7 886 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Styxl1Q9DAR2 321 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Tmem2Q5FWI3 1383 aa14.07□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Gtpbp6Q3U6U5 514 aa14.06□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Phlpp2Q8BXA7 1320 aa14.06□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Chl1P70232 1209 aa14.06□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Amotl2Q8K371 772 aa14.06□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Mfap1aC0HKD8 439 aaKnown RBP14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Mfap1bC0HKD9 439 aaKnown RBP14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Evi5lH3BKQ3 813 aa14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 HypkQ9CR41 129 aa14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Phlpp1Q8CHE4 1687 aa14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Triml2E9PW10 424 aa14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Cog6Q8R3I3 657 aa14.05□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Ncapd2Q8K2Z4 1392 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Tnnt1O88346 262 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Map7O88735 730 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Ano8Q6PB70 1060 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Ccdc96Q9CR92 584 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Slit2Q9R1B9 1521 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Q3TQI7 289 aaKnown RBP14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Dnajc10Q9DC23 793 aa14.04□□□□□ -0.16
Ddx55-201ENSMUST00000071057 Slain2Q8CI08 581 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms