RNA–Protein interactions for RNA: ENSMUST00000067072.4

Cthrc1-201, Transcript of Collagen triple helix repeat-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cthrc1, Length 1,166 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1-201ENSMUST00000067072 Ccne1Q61457 408 aa16.12■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Sos2Q02384 1333 aa16.12■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Smg6P61406 1418 aaKnown RBP16.11■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Aplp2Q06335 707 aa16.1■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Speer4bQ9D9F7 267 aa16.1■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Kcnn1Q9EQR3 537 aa16.1■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Shank3Q4ACU6 1730 aa16.1■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Rapgefl1Q68EF8 662 aa16.09■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Hirip3Q8BLH7 601 aa16.09■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Emilin1Q99K41 1017 aa16.09■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 IncenpQ9WU62 880 aa16.09■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Parp14Q2EMV9 1817 aa16.08■□□□□ 0.17
Cthrc1-201ENSMUST00000067072 Ppef1O35655 650 aa16.08■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Scaf1Q5U4C3 1256 aaKnown RBP16.08■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Ppm1fQ8CGA0 452 aa16.08■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Lrp5Q91VN0 1614 aa16.08■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Yy1Q00899 414 aa16.07■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Rad23bP54728 416 aa16.06■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Kiaa0319lQ8K135 1048 aa16.06■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Klc3Q91W40 508 aa16.05■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Rps6ka4Q9Z2B9 773 aa16.05■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 ApobrQ8VBT6 942 aa16.03■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Zswim8Q3UHH1 1832 aaKnown RBP16.03■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 Simc1E9Q6E9 1354 aa16.02■□□□□ 0.16
Cthrc1-201ENSMUST00000067072 IbtkQ6ZPR6 1352 aaKnown RBP16.01■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Msl1Q6PDM1 616 aa16.01■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Larp1Q6ZQ58 1072 aaKnown RBP16.01■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Kdm6aO70546 1401 aa16.01■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Rnf180Q3U827 592 aa16■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 4930572O03RikQ8C5Y0 211 aa16■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Igsf1Q7TQA1 1317 aa15.99■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Hoxb7P09024 217 aa15.99■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Jdp2P97875 163 aa15.99■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Bicdl1A0JNT9 577 aa15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 MeiocA2AG06 965 aa15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Hmgb2P30681 210 aaKnown RBP15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 ThemisQ8BGW0 636 aa15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Ppp1r37Q8BKR5 712 aa15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Mtfr1lQ9CWE0 289 aa15.98■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 PappaQ8R4K8 1624 aa15.97■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Ccnl1Q52KE7 532 aaKnown RBP15.97■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Usp21Q9QZL6 566 aa15.97■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Magea6O89010 325 aa15.96■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 ErfeQ6PGN1 340 aa15.96■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Magea3Q6T340 320 aa15.96■□□□□ 0.15
Cthrc1-201ENSMUST00000067072 Zdbf2Q5SS00 2493 aaKnown RBP15.95■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Sgip1Q8VD37 806 aa15.95■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Rad17Q6NXW6 688 aa15.94■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Dcaf11Q91VU6 549 aa15.94■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gm21663A0A0G2JE01 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gm7361D3Z6R1 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 5031410I06RikE9Q4E0 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gm1979E9QAN3 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gm5862K7N5V5 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gm10220K7N660 267 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Eya1P97767 591 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Col23a1Q8K4G2 532 aa15.92■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 PrxO55103 1391 aa15.91■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Tmf1B9EKI3 1091 aa15.91■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Gpr162Q3UN16 588 aa15.9■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Pank3Q8R2W9 370 aa15.9■□□□□ 0.14
Cthrc1-201ENSMUST00000067072 Eif4a2P10630 407 aa15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 NppbP40753 121 aa15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Cwc22Q8C5N3 908 aaKnown RBP15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Eif3bQ8JZQ9 803 aaKnown RBP15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Mrps5Q99N87 432 aaKnown RBP15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Inpp5dQ9ES52 1191 aa15.89■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Tjp1P39447 1745 aaKnown RBP15.88■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Sin3aQ60520 1274 aaKnown RBP15.88■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Slc5a1Q8C3K6 665 aa15.88■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Znrd1-asQ8R0E5 213 aa15.88■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Crb1Q8VHS2 1405 aa15.87■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Sumf1Q8R0F3 372 aa15.87■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Tns2Q8CGB6 1400 aa15.86■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 MpripP97434 1024 aa15.86■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Prom2Q3UUY6 835 aa15.86■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 CoblQ5NBX1 1337 aaKnown RBP15.86■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Sned1Q70E20 1403 aa15.85■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Pip4p2Q9CZX7 257 aa15.85■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Hdac6Q9Z2V5 1149 aa15.85■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Gm13023A2A8N2 498 aa15.84■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Smarcc1P97496 1104 aa15.84■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Asic4Q7TNS7 539 aa15.84■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Plin1Q8CGN5 517 aa15.84■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Col11a2Q64739 1736 aa15.84■□□□□ 0.13
Cthrc1-201ENSMUST00000067072 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.83■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Ubr3Q5U430 1889 aa15.82■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Rnaseh2aQ9CWY8 301 aa15.82■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 PnisrA2AJT4 805 aaKnown RBP15.81■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Pitpnm1O35954 1243 aa15.81■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Plch1Q4KWH5 1682 aa15.81■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Ints5Q8CHT3 1018 aa15.81■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Phkg2Q9DB30 406 aa15.81■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 AcrbpQ3V140 540 aa15.8■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Rsph6aQ8CDR2 708 aa15.8■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Kiaa1107Q80TK0 1369 aa15.79■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Jmjd4Q8BFT6 427 aa15.79■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Chmp7Q8R1T1 451 aa15.79■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Atg3Q9CPX6 314 aa15.79■□□□□ 0.12
Cthrc1-201ENSMUST00000067072 Spata31d1bE9QA57 1361 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms