RNA–Protein interactions for RNA: ENSMUST00000067072.4

Cthrc1-201, Transcript of Collagen triple helix repeat-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cthrc1, Length 1,166 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1-201ENSMUST00000067072 Mapk8ip2Q9ERE9 830 aa28.42■■■□□ 2.14
Cthrc1-201ENSMUST00000067072 Chic1Q8CBW7 227 aa28.41■■■□□ 2.14
Cthrc1-201ENSMUST00000067072 Gm35339A0A140LHH9 1649 aa27.45■■□□□ 1.99
Cthrc1-201ENSMUST00000067072 NischQ80TM9 1593 aa26.93■■□□□ 1.9
Cthrc1-201ENSMUST00000067072 Abcc9P70170 1546 aa26.13■■□□□ 1.77
Cthrc1-201ENSMUST00000067072 Abcc8B2RUS7 1588 aa26.12■■□□□ 1.77
Cthrc1-201ENSMUST00000067072 Phf23Q8BSN5 401 aa25.63■■□□□ 1.69
Cthrc1-201ENSMUST00000067072 ScribQ80U72 1612 aa25.52■■□□□ 1.68
Cthrc1-201ENSMUST00000067072 NacadQ5SWP3 1504 aa24.58■■□□□ 1.53
Cthrc1-201ENSMUST00000067072 Kdm5dQ62240 1548 aa24.56■■□□□ 1.52
Cthrc1-201ENSMUST00000067072 Gab3Q8BSM5 595 aa24.24■■□□□ 1.47
Cthrc1-201ENSMUST00000067072 Plppr3Q7TPB0 716 aa24.14■■□□□ 1.45
Cthrc1-201ENSMUST00000067072 Sycp2Q9CUU3 1500 aa24.13■■□□□ 1.45
Cthrc1-201ENSMUST00000067072 Dcaf1Q80TR8 1506 aa23.93■■□□□ 1.42
Cthrc1-201ENSMUST00000067072 BicraF8VPZ9 1578 aa23.91■■□□□ 1.42
Cthrc1-201ENSMUST00000067072 Dnajc5bQ9CQ94 199 aa23.9■■□□□ 1.42
Cthrc1-201ENSMUST00000067072 Rb1cc1Q9ESK9 1588 aa23.48■■□□□ 1.35
Cthrc1-201ENSMUST00000067072 Thoc2B1AZI6 1594 aaKnown RBP23.3■■□□□ 1.32
Cthrc1-201ENSMUST00000067072 Pds5bQ4VA53 1446 aaKnown RBP23.25■■□□□ 1.31
Cthrc1-201ENSMUST00000067072 Senp3Q9EP97 568 aaKnown RBP23.23■■□□□ 1.31
Cthrc1-201ENSMUST00000067072 Baz1aO88379 1555 aa23.06■■□□□ 1.28
Cthrc1-201ENSMUST00000067072 Atad2bE9Q166 1460 aaKnown RBP22.96■■□□□ 1.27
Cthrc1-201ENSMUST00000067072 Cc2d2aQ8CFW7 1633 aa22.94■■□□□ 1.26
Cthrc1-201ENSMUST00000067072 Ccdc180J3QNE4 1664 aa22.93■■□□□ 1.26
Cthrc1-201ENSMUST00000067072 Rhox8Q6VSS7 320 aa22.92■■□□□ 1.26
Cthrc1-201ENSMUST00000067072 Crybg2B7ZCC2 1516 aa22.9■■□□□ 1.26
Cthrc1-201ENSMUST00000067072 Zcchc6Q5BLK4 1491 aaKnown RBP22.87■■□□□ 1.25
Cthrc1-201ENSMUST00000067072 Ercc6F8VPZ5 1481 aa22.84■■□□□ 1.25
Cthrc1-201ENSMUST00000067072 Smarca2Q6DIC0 1577 aa22.7■■□□□ 1.22
Cthrc1-201ENSMUST00000067072 Smarca4Q3TKT4 1613 aaKnown RBP22.66■■□□□ 1.22
Cthrc1-201ENSMUST00000067072 Fam135aQ6NS59 1506 aa22.66■■□□□ 1.22
Cthrc1-201ENSMUST00000067072 Iqgap2Q3UQ44 1575 aa22.63■■□□□ 1.21
Cthrc1-201ENSMUST00000067072 Cecr2E9Q2Z1 1453 aa22.47■■□□□ 1.19
Cthrc1-201ENSMUST00000067072 Wdr62Q3U3T8 1523 aa22.47■■□□□ 1.19
Cthrc1-201ENSMUST00000067072 Frmpd1A2AKB4 1549 aa22.42■■□□□ 1.18
Cthrc1-201ENSMUST00000067072 Phldb1Q6PDH0 1371 aaKnown RBP22.36■■□□□ 1.17
Cthrc1-201ENSMUST00000067072 Baz1bQ9Z277 1479 aa22.25■■□□□ 1.15
Cthrc1-201ENSMUST00000067072 Ubl4bQ9CQ84 188 aa22.21■■□□□ 1.15
Cthrc1-201ENSMUST00000067072 Unc13aQ4KUS2 1712 aa22.2■■□□□ 1.14
Cthrc1-201ENSMUST00000067072 Dnajc5P60904 198 aa22.15■■□□□ 1.14
Cthrc1-201ENSMUST00000067072 Mrc2Q64449 1479 aa22.14■■□□□ 1.13
Cthrc1-201ENSMUST00000067072 Trim41Q5NCC3 630 aa22.01■■□□□ 1.11
Cthrc1-201ENSMUST00000067072 Cttnbp2B9EJA2 1648 aa21.88■■□□□ 1.09
Cthrc1-201ENSMUST00000067072 CftrP26361 1476 aa21.85■■□□□ 1.09
Cthrc1-201ENSMUST00000067072 Synj1Q8CHC4 1574 aa21.82■■□□□ 1.08
Cthrc1-201ENSMUST00000067072 Lrriq1Q0P5X1 1673 aa21.75■■□□□ 1.07
Cthrc1-201ENSMUST00000067072 Kcna4Q61423 654 aa21.74■■□□□ 1.07
Cthrc1-201ENSMUST00000067072 Rtl1Q7M732 1744 aa21.71■■□□□ 1.07
Cthrc1-201ENSMUST00000067072 Brd4Q9ESU6 1400 aaKnown RBP21.67■■□□□ 1.06
Cthrc1-201ENSMUST00000067072 Cux2P70298 1426 aa21.59■■□□□ 1.05
Cthrc1-201ENSMUST00000067072 Kif21aQ9QXL2 1672 aa21.59■■□□□ 1.05
Cthrc1-201ENSMUST00000067072 Rsf1E9PWW9 1441 aaKnown RBP21.56■■□□□ 1.04
Cthrc1-201ENSMUST00000067072 Ccdc136Q3TVA9 1136 aa21.52■■□□□ 1.04
Cthrc1-201ENSMUST00000067072 Kif15Q6P9L6 1387 aa21.51■■□□□ 1.03
Cthrc1-201ENSMUST00000067072 Esf1Q3V1V3 845 aaKnown RBP21.49■■□□□ 1.03
Cthrc1-201ENSMUST00000067072 Eif4g3Q80XI3 1579 aaKnown RBP21.41■■□□□ 1.02
Cthrc1-201ENSMUST00000067072 Shroom2A2ALU4 1481 aa21.33■■□□□ 1.01
Cthrc1-201ENSMUST00000067072 Lamc3Q9R0B6 1581 aa21.31■■□□□ 1
Cthrc1-201ENSMUST00000067072 Npm1Q61937 292 aaKnown RBP21.3■■□□□ 1
Cthrc1-201ENSMUST00000067072 Fam163aQ8CAA5 168 aa21.3■■□□□ 1
Cthrc1-201ENSMUST00000067072 Cep164Q5DU05 1446 aa21.2■□□□□ 0.98
Cthrc1-201ENSMUST00000067072 Urb2E9Q7L1 1524 aaKnown RBP21.17■□□□□ 0.98
Cthrc1-201ENSMUST00000067072 Col17a1Q07563 1470 aa21.13■□□□□ 0.97
Cthrc1-201ENSMUST00000067072 Plb1Q3TTY0 1478 aa21.11■□□□□ 0.97
Cthrc1-201ENSMUST00000067072 Dhx29Q6PGC1 1365 aaKnown RBP21.1■□□□□ 0.97
Cthrc1-201ENSMUST00000067072 Il27Q8K3I6 234 aa21.08■□□□□ 0.97
Cthrc1-201ENSMUST00000067072 Top2bQ64511 1612 aa21.07■□□□□ 0.96
Cthrc1-201ENSMUST00000067072 Pabpn1Q8CCS6 302 aaKnown RBP21.04■□□□□ 0.96
Cthrc1-201ENSMUST00000067072 Crocc2F6XLV1 1638 aa21.03■□□□□ 0.96
Cthrc1-201ENSMUST00000067072 Ccdc18Q640L5 1455 aa21.02■□□□□ 0.96
Cthrc1-201ENSMUST00000067072 Pelp1Q9DBD5 1123 aaKnown RBP20.98■□□□□ 0.95
Cthrc1-201ENSMUST00000067072 TnnQ80Z71 1560 aa20.96■□□□□ 0.95
Cthrc1-201ENSMUST00000067072 LrpprcQ6PB66 1392 aaKnown RBP20.95■□□□□ 0.94
Cthrc1-201ENSMUST00000067072 Rusc2Q80U22 1514 aa20.94■□□□□ 0.94
Cthrc1-201ENSMUST00000067072 Camsap1A2AHC3 1581 aa20.93■□□□□ 0.94
Cthrc1-201ENSMUST00000067072 Ift140E9PY46 1464 aa20.87■□□□□ 0.93
Cthrc1-201ENSMUST00000067072 PogzQ8BZH4 1409 aaKnown RBP20.79■□□□□ 0.92
Cthrc1-201ENSMUST00000067072 Zcchc11B2RX14 1644 aaKnown RBP20.79■□□□□ 0.92
Cthrc1-201ENSMUST00000067072 Cngb1E1AZ71 1325 aa20.78■□□□□ 0.92
Cthrc1-201ENSMUST00000067072 Golga3P55937 1487 aa20.75■□□□□ 0.91
Cthrc1-201ENSMUST00000067072 Duox2A2AQ99 1517 aa20.71■□□□□ 0.91
Cthrc1-201ENSMUST00000067072 Disp1Q3TDN0 1521 aa20.66■□□□□ 0.9
Cthrc1-201ENSMUST00000067072 Setd1bQ8CFT2 1985 aa20.66■□□□□ 0.9
Cthrc1-201ENSMUST00000067072 Hoxd11P23813 323 aa20.62■□□□□ 0.89
Cthrc1-201ENSMUST00000067072 Fmn1Q05860 1466 aa20.61■□□□□ 0.89
Cthrc1-201ENSMUST00000067072 Samd9lQ69Z37 1561 aa20.6■□□□□ 0.89
Cthrc1-201ENSMUST00000067072 Pbrm1Q8BSQ9 1634 aaKnown RBP20.59■□□□□ 0.89
Cthrc1-201ENSMUST00000067072 Pcdh10E9PXQ7 1057 aa20.57■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Arhgef5E9Q7D5 1581 aa20.57■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Nup160Q9Z0W3 1402 aaKnown RBP20.57■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Adgrl3Q80TS3 1537 aa20.57■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Grin2bQ01097 1482 aa20.56■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Ttbk1Q6PCN3 1308 aa20.55■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Cc2d2bA0A286YDU8 1405 aa20.55■□□□□ 0.88
Cthrc1-201ENSMUST00000067072 Cep170Q6A065 1588 aa20.51■□□□□ 0.87
Cthrc1-201ENSMUST00000067072 PtprkP35822 1457 aa20.49■□□□□ 0.87
Cthrc1-201ENSMUST00000067072 Gapvd1Q6PAR5 1458 aa20.45■□□□□ 0.86
Cthrc1-201ENSMUST00000067072 Rad54l2Q99NG0 1466 aa20.45■□□□□ 0.86
Cthrc1-201ENSMUST00000067072 AqrQ8CFQ3 1481 aaKnown RBP20.43■□□□□ 0.86
Cthrc1-201ENSMUST00000067072 Fgd6Q69ZL1 1399 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms