RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 HnrnpmQ9D0E1 729 aaKnown RBP21.34■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Tnrc6bQ8BKI2 1810 aaKnown RBP21.33■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Cps1Q8C196 1500 aa21.32■■□□□ 1
Ddx28-201ENSMUST00000058579 PzpQ61838 1495 aa21.32■■□□□ 1
Ddx28-201ENSMUST00000058579 Pik3c2bE9QAN8 1632 aa21.32■■□□□ 1
Ddx28-201ENSMUST00000058579 Pdia3P27773 505 aaKnown RBP21.31■■□□□ 1
Ddx28-201ENSMUST00000058579 Nucb1Q02819 459 aaKnown RBP21.31■■□□□ 1
Ddx28-201ENSMUST00000058579 Gtf2a1Q99PM3 378 aa21.31■■□□□ 1
Ddx28-201ENSMUST00000058579 Smarca5Q91ZW3 1051 aaKnown RBP21.31■■□□□ 1
Ddx28-201ENSMUST00000058579 4930407I10RikD3Z5T8 1512 aa21.31■■□□□ 1
Ddx28-201ENSMUST00000058579 Prkar2bP31324 416 aa21.3■■□□□ 1
Ddx28-201ENSMUST00000058579 Astn2Q80Z10 1352 aa21.29■■□□□ 1
Ddx28-201ENSMUST00000058579 TmpoQ61033 693 aaKnown RBP21.29■■□□□ 1
Ddx28-201ENSMUST00000058579 Pibf1E9Q6K3 756 aa21.29■■□□□ 1
Ddx28-201ENSMUST00000058579 Phf23Q8BSN5 401 aa21.29■■□□□ 1
Ddx28-201ENSMUST00000058579 MyclP10166 368 aa21.28■■□□□ 1
Ddx28-201ENSMUST00000058579 Bloc1s4Q8VED2 215 aa21.28■■□□□ 1
Ddx28-201ENSMUST00000058579 Bag4Q8CI61 457 aa21.27■■□□□ 1
Ddx28-201ENSMUST00000058579 Adgrb1Q3UHD1 1582 aa21.26■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Med1Q925J9 1575 aa21.26■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Stk11ipQ3TAA7 1072 aa21.26■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Ggnbp2Q5SV77 696 aa21.26■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Mdc1Q5PSV9 1707 aa21.26■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Atg4a-psA0A0G2JFS9 396 aa21.25■□□□□ 0.99
Ddx28-201ENSMUST00000058579 SlkO54988 1233 aa21.25■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Atg4aQ8C9S8 396 aa21.25■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Elp1Q7TT37 1333 aaKnown RBP21.25■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Cyp46a1Q9WVK8 500 aa21.25■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Sirt1Q923E4 737 aa21.24■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Zkscan1Q8BGS3 561 aaKnown RBP21.24■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Paxip1Q6NZQ4 1056 aa21.22■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Sv2bQ8BG39 683 aa21.22■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Znf335A2A5K6 1337 aa21.22■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Prim1P20664 417 aa21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Tmx3Q8BXZ1 456 aa21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Tet3Q8BG87 1668 aa21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Rtf1A2AQ19 715 aaKnown RBP21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Q9D2X8 372 aa21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 Cyp27a1Q9DBG1 533 aa21.21■□□□□ 0.99
Ddx28-201ENSMUST00000058579 CemipQ8BI06 1361 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Rasa1E9PYG6 1038 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Q3UJC8 639 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 NgefQ8CHT1 710 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Trim44Q9QXA7 346 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Arap3Q8R5G7 1538 aa21.2■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Rreb1Q3UH06 1700 aaKnown RBP21.19■□□□□ 0.98
Ddx28-201ENSMUST00000058579 NalcnQ8BXR5 1738 aa21.19■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Cdk12Q14AX6 1484 aaKnown RBP21.19■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Zfp777B9EKF4 885 aa21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Erc2Q6PH08 957 aa21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Rrp9Q91WM3 475 aaKnown RBP21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Parp14Q2EMV9 1817 aa21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 N4bp2F8VQG7 1678 aaKnown RBP21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Vsig10D3YX43 558 aa21.18■□□□□ 0.98
Ddx28-201ENSMUST00000058579 GphnQ8BUV3 769 aaKnown RBP21.17■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Bcar3Q9QZK2 820 aa21.17■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Cc2d1aQ8K1A6 943 aa21.16■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Snap23O09044 210 aa21.16■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Mrps27Q8BK72 415 aaKnown RBP21.16■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Gnai2P08752 355 aaKnown RBP21.15■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Dnajc5P60904 198 aa21.15■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Slit2Q9R1B9 1521 aa21.15■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Bcl9Q9D219 1425 aa21.15■□□□□ 0.98
Ddx28-201ENSMUST00000058579 Zkscan16A2ALW2 728 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Zkscan2G3X952 960 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 ImpactO55091 318 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Fam83gQ5SWY7 812 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Ap3b2Q9JME5 1082 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Frmpd2A0A140LI67 1392 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Rnf123Q5XPI3 1314 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Srgap3Q812A2 1099 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Nphp1Q9QY53 687 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Map2P20357 1828 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Ubr1O70481 1757 aa21.13■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Eya1P97767 591 aa21.12■□□□□ 0.97
Ddx28-201ENSMUST00000058579 PtmsQ9D0J8 101 aaKnown RBP21.12■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Igsf1Q7TQA1 1317 aa21.12■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Zdhhc9P59268 364 aa21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Q3TQI7 289 aaKnown RBP21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Ppp1r42Q8R1Z4 357 aa21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 ScaperF8VQ70 1398 aaKnown RBP21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 CalcaP70160 136 aa21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 RestQ8VIG1 1082 aa21.11■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Msh6P54276 1358 aaKnown RBP21.1■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Pik3c2aQ61194 1686 aa21.1■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Rrp12Q6P5B0 1295 aaKnown RBP21.1■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Dennd6aQ8BH65 605 aa21.1■□□□□ 0.97
Ddx28-201ENSMUST00000058579 D430041D05RikF6ZGR6 1678 aa21.1■□□□□ 0.97
Ddx28-201ENSMUST00000058579 MlecQ6ZQI3 291 aaKnown RBP21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Cabp4Q8VHC5 271 aa21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Ptpdc1Q6NZK8 747 aa21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Prune1Q8BIW1 454 aa21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Foxp4Q9DBY0 795 aaKnown RBP21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 FancaQ9JL70 1439 aa21.09■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Gdpd2Q9ESM6 539 aa21.08■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Topaz1E5FYH1 1653 aa21.08■□□□□ 0.97
Ddx28-201ENSMUST00000058579 Camta1A2A891 1682 aa21.08■□□□□ 0.96
Ddx28-201ENSMUST00000058579 Mmp8O70138 465 aa21.08■□□□□ 0.96
Ddx28-201ENSMUST00000058579 Hmox1P14901 289 aa21.07■□□□□ 0.96
Ddx28-201ENSMUST00000058579 Sox12Q04890 314 aa21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms