RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Pik3c2aQ61194 1686 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Alpk3Q924C5 1678 aa8.93□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Rims2Q9EQZ7 1530 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Dmrtc1Q9D9R7 182 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 C5P06684 1680 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Q8BT18 775 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Amotl2Q8K371 772 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Bcl9Q9D219 1425 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Med1Q925J9 1575 aa8.92□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Vamp4O70480 141 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Tnnt1O88346 262 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Hoxb7P09024 217 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Hoxc9P09633 260 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Camta1A2A891 1682 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 NalcnQ8BXR5 1738 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Plekhm2Q80TQ5 1018 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Dnajc10Q9DC23 793 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Sipa1l2Q80TE4 1722 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Als2Q920R0 1651 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Phf23Q8BSN5 401 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 TatQ8QZR1 454 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Znf335A2A5K6 1337 aa8.91□□□□□ -0.98
Clrn1-202ENSMUST00000055636 PaskQ8CEE6 1383 aa8.9□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Cdk12Q14AX6 1484 aaKnown RBP8.9□□□□□ -0.98
Clrn1-202ENSMUST00000055636 Gnai1B2RSH2 354 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Zfp777B9EKF4 885 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Aifm3Q3TY86 605 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Q3UPC7 1272 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Gnai3Q9DC51 354 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Map2P20357 1828 aa8.9□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Map7O88735 730 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Amigo3Q8C2S7 508 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ciz1Q8VEH2 845 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Gm10093D3YYI8 482 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Hdac1O09106 482 aaKnown RBP8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 DekQ7TNV0 380 aaKnown RBP8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Uhrf1bp1B2KF50 1429 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Col14a1Q80X19 1797 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Rtf1A2AQ19 715 aaKnown RBP8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Brd1E9PZ26 1189 aaKnown RBP8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Hs1bp3Q3TC93 395 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Tmem2Q5FWI3 1383 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 CemipQ8BI06 1361 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Nsd3Q6P2L6 1439 aa8.89□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ubr1O70481 1757 aa8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Rimbp3Q3V0F0 1606 aa8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 SkilQ60665 675 aa8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Rrp12Q6P5B0 1295 aaKnown RBP8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Farp2Q91VS8 1065 aa8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Tfip11Q9ERA6 838 aaKnown RBP8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Rsph3aQ3UFY4 516 aa8.88□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Col16a1Q8BLX7 1580 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Wdr17E9Q271 1322 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Dzip1Q8BMD2 852 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Trim44Q9QXA7 346 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Spef2Q8C9J3 1734 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Dhx16G3X8X0 1044 aaKnown RBP8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Atf3Q60765 181 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Isy1Q69ZQ2 285 aaKnown RBP8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Rapgef3Q8VCC8 918 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Atp7bQ64446 1462 aa8.87□□□□□ -0.99
Clrn1-202ENSMUST00000055636 GorabQ8BRM2 368 aa8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Erbb4Q61527 1308 aa8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ythdc1E9Q5K9 736 aaKnown RBP8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Dixdc1Q80Y83 711 aa8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Clcn1Q64347 994 aa8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ncbp3Q8BZR9 615 aaKnown RBP8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Thsd7aQ69ZU6 1645 aa8.86□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ncapd2Q8K2Z4 1392 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Mon2Q80TL7 1715 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ccdc171E9Q1U1 1324 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ric3Q8BPM6 367 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Tbc1d9Q3UYK3 1264 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Scn4aQ9ER60 1841 aa8.85□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Cc2d1aQ8K1A6 943 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Bloc1s4Q8VED2 215 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Acsbg1Q99PU5 721 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Irf5P56477 497 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Q3TQI7 289 aaKnown RBP8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 HypkQ9CR41 129 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 KnstrnQ9D9Z1 312 aaKnown RBP8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Gm10471E9Q1C7 252 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Bcl2l13P59017 434 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Nkx2-3P97334 362 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Tmx3Q8BXZ1 456 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Aldh1l1Q8R0Y6 902 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Ripk4Q9ERK0 786 aa8.84□□□□□ -0.99
Clrn1-202ENSMUST00000055636 Mdc1Q5PSV9 1707 aa8.84□□□□□ -1
Clrn1-202ENSMUST00000055636 Gm21698A0A087WQP8 267 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Wdr63B2RY71 923 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Gm21671G3UY31 267 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Fam83gQ5SWY7 812 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Tex2Q6ZPJ0 1128 aaKnown RBP8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Ddrgk1Q80WW9 315 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Kdm4cQ8VCD7 1054 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Rbm10Q99KG3 930 aaKnown RBP8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Nrxn3Q6P9K9 1571 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Fmnl2A2APV2 1086 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Gimap6Q8K349 305 aa8.83□□□□□ -1
Clrn1-202ENSMUST00000055636 Pdia4P08003 638 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms