RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Ncbp3Q8BZR9 615 aaKnown RBP14.4□□□□□ -0.1
Ckap2-201ENSMUST00000046916 Ralbp1Q62172 648 aa14.4□□□□□ -0.1
Ckap2-201ENSMUST00000046916 RgmbQ7TQ33 436 aa14.4□□□□□ -0.1
Ckap2-201ENSMUST00000046916 Ankrd23Q812A3 306 aa14.4□□□□□ -0.1
Ckap2-201ENSMUST00000046916 CrklP47941 303 aa14.39□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Sgsm1Q8BPQ7 1093 aa14.39□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Tmc1Q8R4P5 757 aa14.39□□□□□ -0.11
Ckap2-201ENSMUST00000046916 TkfcQ8VC30 578 aa14.39□□□□□ -0.11
Ckap2-201ENSMUST00000046916 CrbnQ8C7D2 445 aa14.38□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Zcrb1Q9CZ96 217 aaKnown RBP14.38□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Map4k4P97820 1233 aaKnown RBP14.38□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Kiaa0319Q5SZV5 1081 aa14.38□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Smc5Q8CG46 1101 aaKnown RBP14.38□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Nkx1-2P42580 305 aa14.37□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Zbtb4Q5F293 982 aa14.37□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Ccdc30Q8BVF4 654 aa14.36□□□□□ -0.11
Ckap2-201ENSMUST00000046916 OscarQ8VBT3 265 aa14.36□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Hoxc9P09633 260 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Uspl1Q3ULM6 1089 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Col15a1O35206 1367 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 B4galnt3Q6L8S8 986 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 OptnQ8K3K8 584 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Sos2Q02384 1333 aa14.35□□□□□ -0.11
Ckap2-201ENSMUST00000046916 MpndQ3TV65 487 aa14.34□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Cabp4Q8VHC5 271 aa14.34□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Zfyve9A2A8R0 1397 aa14.34□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Nlrp6Q91WS2 869 aa14.34□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Speer4f1Q9D5Q6 258 aa14.34□□□□□ -0.11
Ckap2-201ENSMUST00000046916 CanxP35564 591 aaKnown RBP14.33□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Afg3l2Q8JZQ2 802 aaKnown RBP14.33□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Sart3Q9JLI8 962 aaKnown RBP14.33□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Kiaa1107Q80TK0 1369 aa14.33□□□□□ -0.11
Ckap2-201ENSMUST00000046916 Sik1Q60670 779 aa14.33□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Nckap5lQ6GQX2 1323 aa14.33□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Znf521Q6KAS7 1311 aa14.33□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Ipo4Q8VI75 1082 aa14.32□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Golga2Q921M4 999 aa14.32□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Vars2Q3U2A8 1060 aa14.31□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Ppm1gQ61074 542 aa14.31□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Zpr1Q62384 459 aa14.31□□□□□ -0.12
Ckap2-201ENSMUST00000046916 NudcO35685 332 aaKnown RBP14.31□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Trim28Q62318 834 aa14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Dcaf11Q91VU6 549 aa14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Chmp5Q9D7S9 219 aa14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Ric1Q69ZJ7 1422 aa14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Ddb1Q3U1J4 1140 aaKnown RBP14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Mre11Q61216 706 aa14.3□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Tns2Q8CGB6 1400 aa14.29□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Cnga1P29974 684 aa14.29□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Dbr1Q923B1 550 aa14.28□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Trpm3Q5F4S9 1721 aa14.28□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Myo5bP21271 1818 aa14.28□□□□□ -0.12
Ckap2-201ENSMUST00000046916 GalcP54818 684 aa14.28□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Shank3Q4ACU6 1730 aa14.27□□□□□ -0.12
Ckap2-201ENSMUST00000046916 Exoc5Q3TPX4 708 aa14.27□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Elp1Q7TT37 1333 aaKnown RBP14.27□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Trim58Q5NCC9 485 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Dnai1Q8C0M8 701 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Akt1s1Q9D1F4 257 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Parp14Q2EMV9 1817 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Arhgap33Q80YF9 1305 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 GakQ99KY4 1305 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ppp1r15aP17564 657 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Pknox2Q8BG99 474 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Kcnn1Q9EQR3 537 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Rps6ka4Q9Z2B9 773 aa14.26□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Znf541Q0GGX2 1363 aa14.25□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ubr2Q6WKZ8 1755 aa14.24□□□□□ -0.13
Ckap2-201ENSMUST00000046916 4930572O03RikQ8C5Y0 211 aa14.24□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Lrit1Q8K099 624 aa14.24□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Tjp1P39447 1745 aaKnown RBP14.24□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Cc2d1aQ8K1A6 943 aa14.24□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Rab11fip3Q8CHD8 1047 aa14.23□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Kndc1Q0KK55 1742 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ipo8Q7TMY7 1010 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 GsdmaQ9EST1 446 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Pnpla7A2AJ88 1352 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Cald1E9QA15 768 aaKnown RBP14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ppfibp2O35711 882 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ppp1r37Q8BKR5 712 aa14.22□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Gpr150Q8BL07 427 aa14.21□□□□□ -0.13
Ckap2-201ENSMUST00000046916 Ciz1Q8VEH2 845 aa14.21□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Pdlim2Q8R1G6 349 aa14.2□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Ssfa2Q922B9 1252 aa14.2□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Neurod2Q62414 383 aa14.19□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Tmem132eQ6IEE6 982 aa14.19□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Sugp2Q8CH09 1067 aa14.19□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Snapc4Q8BP86 1333 aa14.18□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Hs1bp3Q3TC93 395 aa14.18□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Spata31d1bE9QA57 1361 aa14.17□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Gsdma3Q5Y4Y6 464 aa14.17□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Zranb3Q6NZP1 1069 aa14.17□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Atl3Q91YH5 541 aa14.17□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Lrp5Q91VN0 1614 aa14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Ccdc183A2AJB1 534 aa14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Ppp1r9bQ6R891 817 aaKnown RBP14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Tspyl2Q7TQI8 677 aa14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 ThemisQ8BGW0 636 aa14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Apbb1Q9QXJ1 710 aa14.16□□□□□ -0.14
Ckap2-201ENSMUST00000046916 Rsph6aQ8CDR2 708 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 63.2 ms