RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Atg4aQ8C9S8 396 aa20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Cyp46a1Q9WVK8 500 aa20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Nwd1A6H603 1563 aa20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 ImpactO55091 318 aa20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Chl1P70232 1209 aa20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Elp1Q7TT37 1333 aaKnown RBP20.56■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Mdc1Q5PSV9 1707 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 CalcaP70160 136 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Gdpd2Q9ESM6 539 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Gm9992B2RWK3 458 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Eif4a2P10630 407 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Zdhhc9P59268 364 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Unc93aQ710D3 458 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Cc2d1aQ8K1A6 943 aa20.55■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Kif20bQ80WE4 1774 aaKnown RBP20.54■□□□□ 0.88
Lsm1-201ENSMUST00000038421 4931400O07RikQ9D4M5 137 aa20.53■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Chmp4cQ9D7F7 232 aa20.53■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Kif1aP33173 1695 aa20.53■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Chd4Q6PDQ2 1915 aaKnown RBP20.53■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Ggnbp2Q5SV77 696 aa20.52■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Clcn1Q64347 994 aa20.52■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Erc2Q6PH08 957 aa20.52■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Itsn1Q9Z0R4 1714 aa20.52■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Bcar3Q9QZK2 820 aa20.52■□□□□ 0.88
Lsm1-201ENSMUST00000038421 Zkscan16A2ALW2 728 aa20.51■□□□□ 0.87
Lsm1-201ENSMUST00000038421 4930407I10RikD3Z5T8 1512 aa20.51■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Prune1Q8BIW1 454 aa20.49■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Phf23Q8BSN5 401 aa20.49■□□□□ 0.87
Lsm1-201ENSMUST00000038421 NpatQ8BMA5 1420 aa20.49■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Syce3B5KM66 88 aa20.49■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Gadd45bP22339 160 aa20.48■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Mrps27Q8BK72 415 aaKnown RBP20.48■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Tpm2P58774 284 aa20.47■□□□□ 0.87
Lsm1-201ENSMUST00000038421 TmpoQ61033 693 aaKnown RBP20.47■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Prim1P20664 417 aa20.47■□□□□ 0.87
Lsm1-201ENSMUST00000038421 VgfQ0VGU4 617 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Gm156Q58A37 223 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 NexnQ7TPW1 607 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Sv2bQ8BG39 683 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Erbb4Q61527 1308 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 PtpruB1AUH1 1446 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Hoxb7P09024 217 aa20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Rbm10Q99KG3 930 aaKnown RBP20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 PtmsQ9D0J8 101 aaKnown RBP20.46■□□□□ 0.87
Lsm1-201ENSMUST00000038421 Pdia4P08003 638 aaKnown RBP20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Psme1P97371 249 aa20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 CatipB9EKE5 520 aa20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Rbm27Q5SFM8 1060 aaKnown RBP20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Fez1Q8K0X8 392 aa20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 ScaperF8VQ70 1398 aaKnown RBP20.45■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Phactr2B1AVP0 632 aa20.44■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Rnf214Q8BFU3 668 aaKnown RBP20.44■□□□□ 0.86
Lsm1-201ENSMUST00000038421 RestQ8VIG1 1082 aa20.44■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ush1cQ9ES64 910 aa20.44■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Zfp777B9EKF4 885 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Vwa3bJ9JI28 736 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Snap23O09044 210 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Hmox1P14901 289 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Srgap3Q812A2 1099 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Pabpn1Q8CCS6 302 aaKnown RBP20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Pank2Q3U4S0 443 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ercc6l2Q9JIM3 1537 aa20.43■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Zkscan2G3X952 960 aa20.42■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Txndc2Q6P902 515 aa20.42■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Gemin5Q8BX17 1502 aaKnown RBP20.42■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Fam83gQ5SWY7 812 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ap3b2Q9JME5 1082 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Hsp90b1P08113 802 aaKnown RBP20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Cpa2Q504N0 417 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ptpdc1Q6NZK8 747 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ripk4Q9ERK0 786 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Nphp1Q9QY53 687 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Adgrb1Q3UHD1 1582 aa20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Zc3h13E9Q784 1729 aaKnown RBP20.41■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Gnai2P08752 355 aaKnown RBP20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 NgefQ8CHT1 710 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Rtf1A2AQ19 715 aaKnown RBP20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Pdcl2Q78Y63 240 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Ppp1r42Q8R1Z4 357 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Gripap1Q8VD04 806 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Gm45015A0A140LII9 184 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Gm18336A0A140LIU8 765 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Filip1lQ6P6L0 1131 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Tshz3Q8CGV9 1081 aa20.4■□□□□ 0.86
Lsm1-201ENSMUST00000038421 Rcan3Q9JKK0 239 aa20.39■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Zscan25B2RX31 543 aa20.39■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Becn1O88597 448 aa20.39■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Kif4P33174 1231 aa20.39■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Tex2Q6ZPJ0 1128 aaKnown RBP20.39■□□□□ 0.85
Lsm1-201ENSMUST00000038421 LlphQ9D945 130 aaKnown RBP20.38■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Mum1Q6DID5 682 aa20.38■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Rsph4aQ8BYM7 716 aa20.37■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Mknk2Q8CDB0 459 aa20.37■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Dip2aQ8BWT5 1523 aa20.37■□□□□ 0.85
Lsm1-201ENSMUST00000038421 MccE9PWI3 1003 aa20.37■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Rnf123Q5XPI3 1314 aa20.36■□□□□ 0.85
Lsm1-201ENSMUST00000038421 EvcP57680 1005 aa20.36■□□□□ 0.85
Lsm1-201ENSMUST00000038421 Nol11Q8BJW5 723 aaKnown RBP20.36■□□□□ 0.85
Lsm1-201ENSMUST00000038421 AnlnQ8K298 1121 aaKnown RBP20.36■□□□□ 0.85
Lsm1-201ENSMUST00000038421 St18Q80TY4 1045 aa20.36■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms