RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ahnak2E9PYB0 1738 aaKnown RBP15.89■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Cgnl1Q6AW69 1298 aa15.89■□□□□ 0.13
Rnf4-201ENSMUST00000030992 HnrnpuQ8VEK3 800 aaKnown RBP15.89■□□□□ 0.13
Rnf4-201ENSMUST00000030992 C3P01027 1663 aa15.89■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Terf2O35144 541 aa15.89■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Catsper2A2ARP9 588 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Prim1P20664 417 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Sox12Q04890 314 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Tbc1d9Q3UYK3 1264 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Ggnbp2Q5SV77 696 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Scaf1Q5U4C3 1256 aaKnown RBP15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Ncapd2Q8K2Z4 1392 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Arfgef2A2A5R2 1792 aa15.88■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Robo1O89026 1612 aa15.87■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Eif4g2Q62448 906 aaKnown RBP15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Ano8Q6PB70 1060 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Fam13aQ8BGI4 693 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Cabp4Q8VHC5 271 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Gcc1Q9D4H2 778 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Gm21190A0A0G2JGJ6 266 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Hoxc9P09633 260 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Ap3b2Q9JME5 1082 aa15.86■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Snap23O09044 210 aa15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Plppr3Q7TPB0 716 aa15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Myo5bP21271 1818 aa15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Rtf1A2AQ19 715 aaKnown RBP15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 FanclQ9CR14 375 aa15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 CenppQ9CZ92 286 aa15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Foxp4Q9DBY0 795 aaKnown RBP15.85■□□□□ 0.13
Rnf4-201ENSMUST00000030992 1700019A02RikA0A087WPV9 146 aa15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Triml2E9PW10 424 aa15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Ccne1Q61457 408 aa15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Mcm2P97310 904 aa15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 GphnQ8BUV3 769 aaKnown RBP15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Tmem94Q7TSH8 1360 aa15.84■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Prkar2bP31324 416 aa15.83■□□□□ 0.13
Rnf4-201ENSMUST00000030992 4933416C03RikQ3V063 378 aa15.83■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Rimbp3Q3V0F0 1606 aa15.83■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Nek4Q9Z1J2 792 aa15.83■□□□□ 0.13
Rnf4-201ENSMUST00000030992 Sipa1l2Q80TE4 1722 aa15.83■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Thsd7aQ69ZU6 1645 aa15.83■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Anapc15-psA0A140T8L6 141 aa15.82■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Pibf1E9Q6K3 756 aa15.82■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Slc35g1Q8BY79 368 aa15.82■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Nfat5Q9WV30 1534 aa15.82■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Sv2bQ8BG39 683 aa15.81■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Col14a1Q80X19 1797 aa15.81■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Topaz1E5FYH1 1653 aa15.8■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Kdm4cQ8VCD7 1054 aa15.8■□□□□ 0.12
Rnf4-201ENSMUST00000030992 HypkQ9CR41 129 aa15.8■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Nup153E9Q3G8 1462 aaKnown RBP15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Ccdc146E9Q9F7 977 aa15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Tfip11Q9ERA6 838 aaKnown RBP15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Alpk3Q924C5 1678 aa15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Atf5O70191 283 aa15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Nsfl1cQ9CZ44 370 aaKnown RBP15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Pnpla7A2AJ88 1352 aa15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Tmem2Q5FWI3 1383 aa15.79■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Unc13bQ9Z1N9 1602 aa15.78■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Atg4a-psA0A0G2JFS9 396 aa15.78■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Atg4aQ8C9S8 396 aa15.78■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Larp1bA0A0A6YXJ7 370 aaKnown RBP15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Fam83gQ5SWY7 812 aa15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Ppp6r3Q922D4 844 aa15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Nid2O88322 1403 aa15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Irx3P81067 507 aa15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 Tmem132eQ6IEE6 982 aa15.77■□□□□ 0.12
Rnf4-201ENSMUST00000030992 EngaseQ8BX80 734 aa15.77■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Smarca5Q91ZW3 1051 aaKnown RBP15.77■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Tns3Q5SSZ5 1440 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Fgd1P52734 960 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Ncoa4Q5U4H9 625 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Ddit3P35639 168 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Cyp2d12Q8BVD2 504 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Dlg5E9Q9R9 1921 aa15.76■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Pdia3P27773 505 aaKnown RBP15.75■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Nucb1Q02819 459 aaKnown RBP15.75■□□□□ 0.11
Rnf4-201ENSMUST00000030992 ScaperF8VQ70 1398 aaKnown RBP15.75■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Gsdma3Q5Y4Y6 464 aa15.74■□□□□ 0.11
Rnf4-201ENSMUST00000030992 GorabQ8BRM2 368 aa15.74■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Gli3Q61602 1583 aa15.74■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Kdm6aO70546 1401 aa15.74■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Ppip5k2Q6ZQB6 1129 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Gnai2P08752 355 aaKnown RBP15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Q3TQI7 289 aaKnown RBP15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 1700010I14RikQ7TPG0 532 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Disp3A3KFU9 1347 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Siglec1Q62230 1695 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Amotl1Q9D4H4 968 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Stk36Q69ZM6 1316 aa15.73■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Rfx1P48377 963 aa15.72■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Cyp46a1Q9WVK8 500 aa15.72■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Rnf123Q5XPI3 1314 aa15.72■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Chpf2Q3UU43 768 aa15.72■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Elp1Q7TT37 1333 aaKnown RBP15.71■□□□□ 0.11
Rnf4-201ENSMUST00000030992 BcorQ8CGN4 1759 aa15.71■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Rsph3aQ3UFY4 516 aa15.71■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Ssh1Q76I79 1042 aa15.71■□□□□ 0.11
Rnf4-201ENSMUST00000030992 Abcc12Q80WJ6 1366 aa15.7■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Mmp8O70138 465 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms