RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Ubr2Q6WKZ8 1755 aa10.8□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Cald1E9QA15 768 aaKnown RBP10.79□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Fgd1P52734 960 aa10.79□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Rsph6aQ8CDR2 708 aa10.79□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Hmgb2P30681 210 aaKnown RBP10.78□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Gtf3c5Q8R2T8 520 aa10.77□□□□□ -0.68
Ssr3-201ENSMUST00000029414 Larp1Q6ZQ58 1072 aaKnown RBP10.77□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gpr150Q8BL07 427 aa10.77□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Q8BT18 775 aa10.77□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Kiaa0319lQ8K135 1048 aa10.77□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ankrd13dQ6PD24 605 aa10.76□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Akt1s1Q9D1F4 257 aa10.76□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Trpm3Q5F4S9 1721 aa10.76□□□□□ -0.69
Ssr3-201ENSMUST00000029414 PsdQ5DTT2 1024 aa10.76□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Myo5bP21271 1818 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 C4bP01029 1738 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ciz1Q8VEH2 845 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Crb1Q8VHS2 1405 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ccdc85cE9Q6B2 420 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 MpripP97434 1024 aa10.75□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Kndc1Q0KK55 1742 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Eif3bQ8JZQ9 803 aaKnown RBP10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 ApobrQ8VBT6 942 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Zfp777B9EKF4 885 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Kif23E9Q5G3 953 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 En2P09066 324 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 AtrnQ9WU60 1428 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Klc3Q91W40 508 aa10.74□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ubr3Q5U430 1889 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Magea1O89006 320 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Magea5O89009 320 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gsdma3Q5Y4Y6 464 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Slc12a5Q91V14 1138 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Magea2Q9R2A2 320 aa10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Zswim8Q3UHH1 1832 aaKnown RBP10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ccnl1Q52KE7 532 aaKnown RBP10.73□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Fam198bQ3UPI1 517 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 P2rx7Q9Z1M0 595 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Tiam2Q6ZPF3 1715 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gm21663A0A0G2JE01 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gm7361D3Z6R1 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 5031410I06RikE9Q4E0 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gm1979E9QAN3 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gm5862K7N5V5 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Gm10220K7N660 267 aa10.72□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Slc5a1Q8C3K6 665 aa10.71□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Phkg2Q9DB30 406 aa10.71□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Ssfa2Q922B9 1252 aa10.71□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Trpc5Q9QX29 975 aa10.71□□□□□ -0.69
Ssr3-201ENSMUST00000029414 Col11a2Q64739 1736 aa10.71□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Igsf1Q7TQA1 1317 aa10.71□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Asic4Q7TNS7 539 aa10.7□□□□□ -0.7
Ssr3-201ENSMUST00000029414 HypkQ9CR41 129 aa10.7□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Amotl1Q9D4H4 968 aa10.7□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Pdzd9Q9D9M4 266 aa10.7□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Aox2Q5SGK3 1345 aa10.69□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Plch1Q4KWH5 1682 aa10.69□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.69□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Hdac6Q9Z2V5 1149 aa10.69□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Hoxd11P23813 323 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Ppp2r1aQ76MZ3 589 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Kcnq2Q9Z351 759 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Ric1Q69ZJ7 1422 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Lrp5Q91VN0 1614 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 TnikP83510 1323 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 PalmQ9Z0P4 383 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 CoblQ5NBX1 1337 aaKnown RBP10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Ints5Q8CHT3 1018 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Anks4bQ8K3X6 423 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Nav1Q8CH77 1875 aa10.68□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Rab11fip3Q8CHD8 1047 aa10.67□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Chmp7Q8R1T1 451 aa10.67□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Fam71e1A1L3C1 212 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 MeiocA2AG06 965 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Kcna3P16390 528 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Mcm10Q0VBD2 885 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Plin1Q8CGN5 517 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 IncenpQ9WU62 880 aa10.66□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Msh6P54276 1358 aaKnown RBP10.65□□□□□ -0.7
Ssr3-201ENSMUST00000029414 ErfeQ6PGN1 340 aa10.65□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Bicdl1A0JNT9 577 aa10.65□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Emilin1Q99K41 1017 aa10.65□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Aebp2Q9Z248 504 aaKnown RBP10.65□□□□□ -0.7
Ssr3-201ENSMUST00000029414 Spata31d1bE9QA57 1361 aa10.65□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Ubxn2bQ0KL01 331 aa10.65□□□□□ -0.71
Ssr3-201ENSMUST00000029414 NrdcQ8BHG1 1161 aa10.65□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Atg3Q9CPX6 314 aa10.65□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Fchsd2Q3USJ8 740 aa10.64□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Sned1Q70E20 1403 aa10.64□□□□□ -0.71
Ssr3-201ENSMUST00000029414 NppbP40753 121 aa10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Jdp2P97875 163 aa10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Jmjd4Q8BFT6 427 aa10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Nlrp6Q91WS2 869 aa10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Togaram1Q6A070 1776 aaKnown RBP10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Eif5bQ05D44 1216 aaKnown RBP10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Tsen2Q6P7W5 460 aa10.63□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Stk31Q99MW1 1018 aa10.62□□□□□ -0.71
Ssr3-201ENSMUST00000029414 StrcQ8VIM6 1809 aa10.62□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Abcc12Q80WJ6 1366 aa10.62□□□□□ -0.71
Ssr3-201ENSMUST00000029414 Mtfr1lQ9CWE0 289 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms