RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Il4rP16382 810 aa23.22■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 CemipQ8BI06 1361 aa23.21■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 Map2P20357 1828 aa23.21■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 Isy1Q69ZQ2 285 aaKnown RBP23.21■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 Ppp6r3Q922D4 844 aa23.21■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 Znf335A2A5K6 1337 aa23.2■■□□□ 1.31
Shkbp1-201ENSMUST00000003857 PzpQ61838 1495 aa23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Fgd1P52734 960 aa23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 HnrnpmQ9D0E1 729 aaKnown RBP23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Rreb1Q3UH06 1700 aaKnown RBP23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Parp14Q2EMV9 1817 aa23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Ppip5k2Q6ZQB6 1129 aa23.2■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Pik3c2aQ61194 1686 aa23.19■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Nucb1Q02819 459 aaKnown RBP23.19■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 TmpoQ61033 693 aaKnown RBP23.19■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 1700019A02RikA0A087WPV9 146 aa23.18■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Prkar2bP31324 416 aa23.18■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Pdia3P27773 505 aaKnown RBP23.18■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Dmrtc1Q9D9R7 182 aa23.18■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Arap3Q8R5G7 1538 aa23.17■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Pdcl3Q8BVF2 240 aa23.17■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Scn7aB1AYL1 1681 aa23.17■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Smarca5Q91ZW3 1051 aaKnown RBP23.16■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Kcnn1Q9EQR3 537 aa23.16■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Casq1O09165 405 aa23.16■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Trpm3Q5F4S9 1721 aa23.15■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Ptpn23Q6PB44 1692 aa23.15■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Ggnbp2Q5SV77 696 aa23.14■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Elp1Q7TT37 1333 aaKnown RBP23.14■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Col16a1Q8BLX7 1580 aa23.14■■□□□ 1.3
Shkbp1-201ENSMUST00000003857 Atg4a-psA0A0G2JFS9 396 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Q3UJC8 639 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Atg4aQ8C9S8 396 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Pibf1E9Q6K3 756 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Camta1A2A891 1682 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 D430041D05RikF6ZGR6 1678 aa23.13■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Abcc10Q8R4P9 1501 aa23.12■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Mon2Q80TL7 1715 aa23.11■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Prim1P20664 417 aa23.11■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Bloc1s4Q8VED2 215 aa23.11■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 DekQ7TNV0 380 aaKnown RBP23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Bag4Q8CI61 457 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Cyp46a1Q9WVK8 500 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Frmpd2A0A140LI67 1392 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Rims2Q9EQZ7 1530 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Zfp777B9EKF4 885 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Msh6P54276 1358 aaKnown RBP23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 PtprvP70289 1705 aa23.09■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 Sv2bQ8BG39 683 aa23.08■■□□□ 1.29
Shkbp1-201ENSMUST00000003857 FancaQ9JL70 1439 aa23.08■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Adamtsl3G3UXC7 1706 aa23.07■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Gtf2a1Q99PM3 378 aa23.07■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Igsf1Q7TQA1 1317 aa23.07■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Rtf1A2AQ19 715 aaKnown RBP23.07■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Stk11ipQ3TAA7 1072 aa23.06■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Zkscan1Q8BGS3 561 aaKnown RBP23.06■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 C5P06684 1680 aa23.06■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Als2Q920R0 1651 aa23.06■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Rnf123Q5XPI3 1314 aa23.06■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 NgefQ8CHT1 710 aa23.05■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Cyp27a1Q9DBG1 533 aa23.05■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Myo5bP21271 1818 aa23.05■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 ScaperF8VQ70 1398 aaKnown RBP23.04■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Snap23O09044 210 aa23.04■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Q9D2X8 372 aa23.04■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Eya1P97767 591 aa23.03■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Erc2Q6PH08 957 aa23.03■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Mrps27Q8BK72 415 aaKnown RBP23.03■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Tmx3Q8BXZ1 456 aa23.03■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Ap3b2Q9JME5 1082 aa23.03■■□□□ 1.28
Shkbp1-201ENSMUST00000003857 Rasa1E9PYG6 1038 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 SlkO54988 1233 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Gnai2P08752 355 aaKnown RBP23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Fam83gQ5SWY7 812 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Dennd6aQ8BH65 605 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Bcar3Q9QZK2 820 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Nlgn1Q99K10 843 aa23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Ahnak2E9PYB0 1738 aaKnown RBP23.01■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Foxp4Q9DBY0 795 aaKnown RBP22.99■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Arfgef2A2A5R2 1792 aa22.99■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Cc2d1aQ8K1A6 943 aa22.99■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Nphp1Q9QY53 687 aa22.99■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Zkscan16A2ALW2 728 aa22.98■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Zkscan2G3X952 960 aa22.98■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Idi1P58044 227 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Srgap3Q812A2 1099 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Paxip1Q6NZQ4 1056 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Ppp1r42Q8R1Z4 357 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Cabp4Q8VHC5 271 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 RestQ8VIG1 1082 aa22.97■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Nckap5lQ6GQX2 1323 aa22.96■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 Mmp8O70138 465 aa22.96■■□□□ 1.27
Shkbp1-201ENSMUST00000003857 ImpactO55091 318 aa22.95■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Zdhhc9P59268 364 aa22.95■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Q3TQI7 289 aaKnown RBP22.95■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Stk36Q69ZM6 1316 aa22.95■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Gm21190A0A0G2JGJ6 266 aa22.94■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Sox12Q04890 314 aa22.94■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Ccne1Q61457 408 aa22.94■■□□□ 1.26
Shkbp1-201ENSMUST00000003857 Ptpdc1Q6NZK8 747 aa22.94■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms