RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 HSPA12AO43301 675 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ATG13O75143 517 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 VNN2O95498 520 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 LATS1O95835 1130 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 FSHBP01225 129 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 IFNA2P01563 188 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 PDGFRAP16234 1089 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 BMXP51813 675 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 SIRPAP78324 504 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 SPOCK1Q08629 439 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ST3GAL1Q11201 340 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 NFE2L1Q14494 772 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 E2F5Q15329 346 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 HYAL4Q2M3T9 481 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 Q4G0T1 1027 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ALS2CLQ60I27 953 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ZBTB49Q6ZSB9 765 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ADIPOR2Q86V24 386 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 TMEM173Q86WV6 379 aaPredicted RBP5.7□□□□□ -1.5
HCFC2-204ENST00000550335 CEP57Q86XR8 500 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 SIX6OS1Q8N1H7 587 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 ARL10Q8N8L6 244 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 FAM98AQ8NCA5 519 aaKnown RBP5.7□□□□□ -1.5
HCFC2-204ENST00000550335 TBC1D16Q8TBP0 767 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 MGME1Q9BQP7 344 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 HAUS8Q9BT25 410 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 TMEM39BQ9GZU3 492 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 PPIL3Q9H2H8 161 aaKnown RBP5.7□□□□□ -1.5
HCFC2-204ENST00000550335 R3HDMLQ9H3Y0 253 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 CHCHD3Q9NX63 227 aaKnown RBP5.7□□□□□ -1.5
HCFC2-204ENST00000550335 CWC25Q9NXE8 425 aaPredicted RBP5.7□□□□□ -1.5
HCFC2-204ENST00000550335 PCDHA12Q9UN75 941 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 BTBD3Q9Y2F9 522 aa5.7□□□□□ -1.5
HCFC2-204ENST00000550335 GAGE12JA6NER3 117 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 H0YAE9 185 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 TMEM189-UBE2V1I3L0A0 370 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 SPINT2O43291 252 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 PRAMEF11O60813 436 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 RECQL5O94762 991 aaPredicted RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 SYF2O95926 243 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 OR52Z1P0C646 297 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 NAGAP17050 411 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 ACHEP22303 614 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 AZGP1P25311 298 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 HNRNPH1P31943 449 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 PCGF2P35227 344 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 GDF5P43026 501 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 DPTQ07507 201 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 CTTNQ14247 550 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 PTGR1Q14914 329 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 MYLK3Q32MK0 819 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 MPP7Q5T2T1 576 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 ZDHHC20Q5W0Z9 365 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 KCTD18Q6PI47 426 aaPredicted RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 Q6ZSV7 163 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 GLRX5Q86SX6 157 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 BEST3Q8N1M1 668 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 EMC1Q8N766 993 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 C7orf57Q8NEG2 295 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 WDR20Q8TBZ3 569 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 MGARPQ8TDB4 240 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 TAS1R2Q8TE23 839 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 SH3GL2Q99962 352 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 SLC25A23Q9BV35 468 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 MMADHCQ9H3L0 296 aaPredicted RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 NOL11Q9H8H0 719 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 MMP25Q9NPA2 562 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 PIH1D3Q9NQM4 214 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 TRNAU1APQ9NX07 287 aaKnown RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 DNAJB9Q9UBS3 223 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 UBA2Q9UBT2 640 aaPredicted RBP5.69□□□□□ -1.5
HCFC2-204ENST00000550335 IFT140Q96RY7 1462 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 TOPBP1Q92547 1522 aa5.69□□□□□ -1.5
HCFC2-204ENST00000550335 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 TMEM8BA6NDV4 472 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 J3QR06 171 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 DDX5P17844 614 aaKnown RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 SP100P23497 879 aaPredicted RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 HOXC13P31276 330 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 ATP6V1E1P36543 226 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 ALDH7A1P49419 539 aaKnown RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 SNRPEP62304 92 aaKnown RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 YWHAHQ04917 246 aaPredicted RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 RBPJQ06330 500 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 SCN1BQ07699 218 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 PTK6Q13882 451 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 CTF1Q16619 201 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 FSCBQ5H9T9 825 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 PAPD4Q6PIY7 484 aaKnown RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 SHC4Q6S5L8 630 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 CHCHD4Q8N4Q1 142 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 OR10S1Q8NGN2 331 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 TMEM163Q8TC26 289 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 UTP15Q8TED0 518 aaKnown RBP5.68□□□□□ -1.5
HCFC2-204ENST00000550335 FAM162AQ96A26 154 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 SLC25A28Q96A46 364 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 CMKLR1Q99788 373 aa5.68□□□□□ -1.5
HCFC2-204ENST00000550335 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms