RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 CHPFQ8IZ52 775 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 EFCAB3Q8N7B9 438 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SRFBP1Q8NEF9 429 aaKnown RBP6.43□□□□□ -1.38
PDE4D-228ENST00000636120 CLEC4CQ8WTT0 213 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 WDR60Q8WVS4 1066 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SHISA4Q96DD7 197 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 S100A14Q9HCY8 104 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 NDOR1Q9UHB4 597 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 LAMA4Q16363 1823 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 LAMB1P07942 1786 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 COL18A1P39060 1754 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 COL16A1Q07092 1604 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-228ENST00000636120 AGPSO00116 658 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 HMGB3O15347 200 aaKnown RBP6.43□□□□□ -1.38
PDE4D-228ENST00000636120 RGS5O15539 181 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 TSPAN19P0C672 248 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SPATA31D3P0C874 917 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 USP4Q13107 963 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SPATA31D4Q6ZUB0 917 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 EPHX4Q8IUS5 362 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 RELL1Q8IUW5 271 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SLC30A8Q8IWU4 369 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 C19orf18Q8NEA5 215 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 DDX1Q92499 740 aaKnown RBP6.43□□□□□ -1.38
PDE4D-228ENST00000636120 RAB11FIP5Q9BXF6 653 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 HPS4Q9NQG7 708 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 SOHLH2Q9NX45 425 aa6.43□□□□□ -1.38
PDE4D-228ENST00000636120 KPNA4O00629 521 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 SUV39H1O43463 412 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MED26O95402 600 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 CBSLP0DN79 551 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PRPS2P11908 318 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 CBSP35520 551 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PSMD8P48556 350 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 C21orf59P57076 290 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 HERC3Q15034 1050 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 GPAT3Q53EU6 434 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 CARD16Q5EG05 197 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NAIF1Q69YI7 327 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TAPT1Q6NXT6 567 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 CCDC103Q8IW40 242 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 KREMEN2Q8NCW0 462 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PIK3C3Q8NEB9 887 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 SPATA22Q8NHS9 363 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MAGEE2Q8TD90 523 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 REXO5Q96IC2 774 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TTLL2Q9BWV7 592 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MINDY3Q9H8M7 445 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TXNRD2Q9NNW7 524 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 ATP6V1HQ9UI12 483 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 CDH22Q9UJ99 828 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MRTO4Q9UKD2 239 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MAFFQ9ULX9 164 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PSMD13Q9UNM6 376 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 FAM159BA6NKW6 160 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 KRT36O76013 467 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 UGT2B4P06133 528 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 HSMCR30P0CW71 290 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 IDSP22304 550 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NR1H2P55055 460 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TRAF3Q13114 568 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MSANTD2Q6P1R3 559 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MED27Q6P2C8 311 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MZT2AQ6P582 158 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 B3GNT6Q6ZMB0 384 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 RINLQ6ZS11 566 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PIGWQ7Z7B1 504 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MIEF2Q96C03 454 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NMD3Q96D46 503 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 MPP4Q96JB8 637 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TBATAQ96M53 351 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 ZMAT2Q96NC0 199 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 AARSD1Q9BTE6 412 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 RAB26Q9ULW5 256 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 GMPPBQ9Y5P6 360 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TULP3O75386 442 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 SNAI1O95863 264 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TRBC1P01850 177 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 FYNP06241 537 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NR2F1P10589 423 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 SLC6A2P23975 617 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 IL1R2P27930 398 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 DGKGP49619 791 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 IDH3AP50213 366 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PSMD7P51665 324 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 FPGSQ05932 587 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NR1D2Q14995 579 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 ATAT1Q5SQI0 421 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TYW3Q6IPR3 259 aaKnown RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 PRSS55Q6UWB4 352 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 NAT16Q8N8M0 369 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 GLB1L3Q8NCI6 653 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 OR7D4Q8NG98 312 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 OR2T34Q8NGX1 318 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 OR2T3Q8NH03 318 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 DCAKDQ8WVC6 231 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 POLR3BQ9NW08 1133 aaPredicted RBP6.42□□□□□ -1.38
PDE4D-228ENST00000636120 TMEM248Q9NWD8 314 aa6.42□□□□□ -1.38
PDE4D-228ENST00000636120 ISM1B1AKI9 464 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms