RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TSPAN3O60637 253 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 TACC1O75410 805 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 TBX18O95935 607 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 MT-CYBP00156 380 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 URODP06132 367 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 TUBBP07437 444 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 GALTP07902 379 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 PATE4P0C8F1 98 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 RNF224P0DH78 156 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 MAOAP21397 527 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 BDKRB2P30411 391 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 MMP14P50281 582 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 HSD17B4P51659 736 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ARF3P61204 181 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 TUBB4BP68371 445 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ARF1P84077 181 aaKnown RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 PPIGQ13427 754 aaKnown RBP eCLIP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 GTF2H2Q13888 395 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 TCTN1Q2MV58 587 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF876PQ49A33 203 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 SIRPB2Q5JXA9 342 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ATG16L1Q676U5 607 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 GTF2H2CQ6P1K8 395 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 KCTD18Q6PI47 426 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 CEACAM20Q6UY09 585 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF497Q6ZNH5 498 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ASB18Q6ZVZ8 466 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 BBS12Q6ZW61 710 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 LINGO2Q7L985 606 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 SPATA6LQ8N4H0 392 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 LGALS12Q96DT0 336 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 PKNOX2Q96KN3 472 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 SPATA17Q96L03 361 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 SYT17Q9BSW7 474 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 GPR63Q9BZJ6 419 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 NDST4Q9H3R1 872 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 PPP1R3EQ9H7J1 279 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 BPIFA1Q9NP55 256 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 MMP25Q9NPA2 562 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 NFKBIL1Q9UBC1 381 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ODF2LQ9ULJ1 636 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 ISY1Q9ULR0 285 aaKnown RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 MAGED1Q9Y5V3 778 aaPredicted RBP2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 PASKQ96RG2 1323 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 GTPBP10A4D1E9 387 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 PI4KAP2A4QPH2 592 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 GOLGA6L9A6NEM1 432 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 TEX22C9J3V5 150 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 USO1O60763 962 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 WDR1O75083 606 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 TSPAN9O75954 239 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 SCGB1D1O95968 90 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 FAM200BP0CF97 657 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ATP1A3P13637 1013 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 PAX1P15863 534 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 METAP2P50579 478 aaKnown RBP eCLIP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 CUL4AQ13619 759 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 SMC1AQ14683 1233 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 PPP2R5BQ15173 497 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 KRT24Q2M2I5 525 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 FAM205BPQ63HN1 556 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC35E4Q6ICL7 350 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 SLC30A6Q6NXT4 461 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 CPLX2Q6PUV4 134 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 CASC1Q6TDU7 716 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF248Q8NDW4 579 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 TNIP2Q8NFZ5 429 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 HUS1BQ8NHY5 278 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 HMGCLL1Q8TB92 370 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 RSPH1Q8WYR4 309 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ANKRD9Q96BM1 317 aaPredicted RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 RRP36Q96EU6 259 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZNF354BQ96LW1 612 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 C17orf77Q96MU5 243 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 FSD1Q9BTV5 496 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 TKTL2Q9H0I9 626 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 FKRPQ9H9S5 495 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ZCCHC17Q9NP64 241 aaKnown RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 DIAPH3Q9NSV4 1193 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 FAM118AQ9NWS6 357 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 HSPB7Q9UBY9 170 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 TTC7AQ9ULT0 858 aaPredicted RBP2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 ARHGAP26Q9UNA1 814 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 DLGAP4Q9Y2H0 992 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 LOXL2Q9Y4K0 774 aa2.95□□□□□ -1.94
LAPTM4A-202ENST00000483117 A0A1W2PPH5 198 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 H7C0S8 307 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 TBCAO75347 108 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 RTN3O95197 1032 aaPredicted RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 STARD3NLO95772 234 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 APOA4P06727 396 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 HNRNPA1P09651 372 aaKnown RBP eCLIP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 KRT5P13647 590 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 PSMA4P25789 261 aaKnown RBP2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 PGM1P36871 562 aa2.94□□□□□ -1.94
LAPTM4A-202ENST00000483117 DCTP40126 519 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms