RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Mindy1Q76LS9 468 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Olfr1475Q8VEV6 314 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Arhgef10Q8C033 1345 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Chd2E9PZM4 1827 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 DldO08749 509 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Hsfy2Q80Y37 392 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Extl2Q9ES89 330 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Padi4Q9Z183 666 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Myo9bQ9QY06 2114 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ptpn3A2ALK8 913 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cpt2P52825 658 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rpl22P67984 128 aaKnown RBP18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 NkaplQ5SZT7 395 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Bbs4Q8C1Z7 520 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rabl3Q9D4V7 236 aa18.36■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gucy1a2F8VQK3 730 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Prl7a1O54830 266 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 AagabQ8R2R3 316 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mrps23Q8VE22 177 aaKnown RBP18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rtl8cQ9D6I0 112 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gpr137cE9Q343 423 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Hoxb6P09023 224 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Alg11Q3TZM9 492 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc38a5Q3U1J0 479 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tgfbrap1Q3UR70 860 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ntrk3Q6VNS1 825 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mfsd6Q8CBH5 775 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Nkiras2Q9CR56 191 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm7970L7N271 213 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm7980L7N471 213 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rtkn2Q14B46 604 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cyp2j13Q3UNV4 503 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Q8BGA7 448 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Aldh4a1Q8CHT0 562 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Olfr170Q8VGL6 313 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pcdhga3Q91XY5 928 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Alg5Q9DB25 324 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ttll6A4Q9E8 822 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Esp15A8R0U8 85 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8229K7N749 213 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc27a2O35488 620 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rab23P35288 237 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rit2P70425 217 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gtpbp2Q3UJK4 602 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 IcmtQ9EQK7 283 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Nectin3Q9JLB9 549 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Man1b1A2AJ15 658 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Arl6O88848 186 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Nfe2l1Q61985 741 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Serpina3aQ6P4P1 422 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Itgb3bpQ9CQ82 176 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Slc15a2Q9ES07 729 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Bmp2P21274 394 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Bcat1P24288 386 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Fubp1Q91WJ8 651 aaKnown RBP18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cep72Q9D3R3 646 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cyp2j12G3UXT0 502 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Xirp1O70373 1129 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rap1gap2Q5SVL6 712 aaKnown RBP18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gpat3Q8C0N2 438 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Ddx52Q8K301 598 aaKnown RBP18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Meis3P97368 378 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 ZufspQ3T9Z9 577 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Acad9Q8JZN5 625 aaKnown RBP18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Sh3d19Q91X43 789 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gja10Q9WUS4 505 aa18.35■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm45233A0A0N4SVE0 221 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rpl21O09167 160 aaKnown RBP18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Zmat1Q3V0C1 714 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Fam46bQ8C152 427 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Lrrc4Q99PH1 652 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Vmn2r1O70410 912 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Txnl4aP83877 142 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Brat1Q8C3R1 822 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Tcf7l2Q924A0 459 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Atad1Q9D5T0 361 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 H2afb2S4R1M3 115 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rdh8D3Z6W3 317 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Capn3Q64691 821 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Fam92aQ8BP22 355 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Cstf1Q99LC2 431 aaKnown RBP18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Mrpl21Q9D1N9 209 aaKnown RBP18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Catsperg2C6KI89 1145 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Spaca6E9Q8Q8 339 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm3072F6SKY8 209 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8020F6WLE9 229 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm17654F7AXR3 209 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Lgals7O54974 136 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 CkmP07310 381 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Pabpc5Q8C7D3 381 aaKnown RBP18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Dsn1Q9CYC5 348 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 SelenonD3Z2R5 557 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Rnf169E9Q7F2 694 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Kcnn4O89109 425 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 DckP43346 260 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 IduaP48441 634 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Gm8332Q3UTA4 144 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Olfr325Q5NCD2 326 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Bhlhb9Q6PB60 539 aa18.34■□□□□ 0.53
Trim71-201ENSMUST00000111816 Arfgap1Q9EPJ9 414 aa18.34■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms