Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Gm25239-201ENSMUST00000174915 86 ntBASIC37.3■■■■□ 3.56
Pabpc5Q8C7D3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Pabpc5Q8C7D3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Pabpc5Q8C7D3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Pabpc5Q8C7D3 Gm15042-201ENSMUST00000120212 883 ntBASIC32.8■■■□□ 2.84
Pabpc5Q8C7D3 Gm24109-201ENSMUST00000175489 103 ntBASIC32.56■■■□□ 2.8
Pabpc5Q8C7D3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Pabpc5Q8C7D3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.07■■■□□ 2.72
Pabpc5Q8C7D3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Pabpc5Q8C7D3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Pabpc5Q8C7D3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Pabpc5Q8C7D3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Pabpc5Q8C7D3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Pabpc5Q8C7D3 Gm23366-201ENSMUST00000175022 89 ntBASIC31.16■■■□□ 2.58
Pabpc5Q8C7D3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pabpc5Q8C7D3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.81■■■□□ 2.52
Pabpc5Q8C7D3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Pabpc5Q8C7D3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Pabpc5Q8C7D3 Psd-208ENSMUST00000224556 2034 ntBASIC30.56■■■□□ 2.48
Pabpc5Q8C7D3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pabpc5Q8C7D3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pabpc5Q8C7D3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.52■■■□□ 2.48
Pabpc5Q8C7D3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pabpc5Q8C7D3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Pabpc5Q8C7D3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
Pabpc5Q8C7D3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Pabpc5Q8C7D3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pabpc5Q8C7D3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pabpc5Q8C7D3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pabpc5Q8C7D3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Pabpc5Q8C7D3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.17■■■□□ 2.42
Pabpc5Q8C7D3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pabpc5Q8C7D3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.11■■■□□ 2.41
Pabpc5Q8C7D3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pabpc5Q8C7D3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Pabpc5Q8C7D3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Pabpc5Q8C7D3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.72■■■□□ 2.35
Pabpc5Q8C7D3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pabpc5Q8C7D3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.67■■■□□ 2.34
Pabpc5Q8C7D3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pabpc5Q8C7D3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pabpc5Q8C7D3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.57■■■□□ 2.32
Pabpc5Q8C7D3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pabpc5Q8C7D3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pabpc5Q8C7D3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.16■■■□□ 2.26
Pabpc5Q8C7D3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
Pabpc5Q8C7D3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pabpc5Q8C7D3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Pabpc5Q8C7D3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pabpc5Q8C7D3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pabpc5Q8C7D3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pabpc5Q8C7D3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pabpc5Q8C7D3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
Pabpc5Q8C7D3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.81■■■□□ 2.2
Pabpc5Q8C7D3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.78■■■□□ 2.2
Pabpc5Q8C7D3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.77■■■□□ 2.2
Pabpc5Q8C7D3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Pabpc5Q8C7D3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.66■■■□□ 2.18
Pabpc5Q8C7D3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Pabpc5Q8C7D3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.65■■■□□ 2.18
Pabpc5Q8C7D3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pabpc5Q8C7D3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.54■■■□□ 2.16
Pabpc5Q8C7D3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pabpc5Q8C7D3 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.53■■■□□ 2.16
Pabpc5Q8C7D3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pabpc5Q8C7D3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.43■■■□□ 2.14
Pabpc5Q8C7D3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
Pabpc5Q8C7D3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpc5Q8C7D3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpc5Q8C7D3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpc5Q8C7D3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Pabpc5Q8C7D3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpc5Q8C7D3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pabpc5Q8C7D3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Pabpc5Q8C7D3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpc5Q8C7D3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.28■■■□□ 2.12
Pabpc5Q8C7D3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpc5Q8C7D3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.18■■■□□ 2.1
Pabpc5Q8C7D3 Gm26115-201ENSMUST00000175605 87 ntBASIC28.15■■■□□ 2.1
Pabpc5Q8C7D3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
Pabpc5Q8C7D3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.12■■■□□ 2.09
Pabpc5Q8C7D3 Rab21-202ENSMUST00000218831 843 ntBASIC28.12■■■□□ 2.09
Pabpc5Q8C7D3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Pabpc5Q8C7D3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pabpc5Q8C7D3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Pabpc5Q8C7D3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.03■■■□□ 2.08
Pabpc5Q8C7D3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pabpc5Q8C7D3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28■■■□□ 2.07
Pabpc5Q8C7D3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28■■■□□ 2.07
Pabpc5Q8C7D3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Pabpc5Q8C7D3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Pabpc5Q8C7D3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pabpc5Q8C7D3 Gm8109-201ENSMUST00000194076 746 ntBASIC27.86■■■□□ 2.05
Pabpc5Q8C7D3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Pabpc5Q8C7D3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Pabpc5Q8C7D3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pabpc5Q8C7D3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Pabpc5Q8C7D3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pabpc5Q8C7D3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pabpc5Q8C7D3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms