Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm25239-201ENSMUST00000174915 86 ntBASIC39.95■■■■□ 3.99
Brat1Q8C3R1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
Brat1Q8C3R1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Brat1Q8C3R1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Brat1Q8C3R1 Gm15042-201ENSMUST00000120212 883 ntBASIC35.22■■■■□ 3.23
Brat1Q8C3R1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Brat1Q8C3R1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
Brat1Q8C3R1 Gm15045-201ENSMUST00000117359 883 ntBASIC34.49■■■■□ 3.11
Brat1Q8C3R1 Gm24109-201ENSMUST00000175489 103 ntBASIC34.47■■■■□ 3.11
Brat1Q8C3R1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Brat1Q8C3R1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
Brat1Q8C3R1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Brat1Q8C3R1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Brat1Q8C3R1 Gm23366-201ENSMUST00000175022 89 ntBASIC33.41■■■□□ 2.94
Brat1Q8C3R1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.23■■■□□ 2.91
Brat1Q8C3R1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Brat1Q8C3R1 Psd-208ENSMUST00000224556 2034 ntBASIC33.14■■■□□ 2.9
Brat1Q8C3R1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Brat1Q8C3R1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.85
Brat1Q8C3R1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Brat1Q8C3R1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Brat1Q8C3R1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Brat1Q8C3R1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Brat1Q8C3R1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
Brat1Q8C3R1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Brat1Q8C3R1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.46■■■□□ 2.79
Brat1Q8C3R1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Brat1Q8C3R1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Brat1Q8C3R1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.31■■■□□ 2.76
Brat1Q8C3R1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Brat1Q8C3R1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Brat1Q8C3R1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.99■■■□□ 2.71
Brat1Q8C3R1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.89■■■□□ 2.7
Brat1Q8C3R1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Brat1Q8C3R1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Brat1Q8C3R1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.63■■■□□ 2.65
Brat1Q8C3R1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Brat1Q8C3R1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Brat1Q8C3R1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Brat1Q8C3R1 Gm25238-201ENSMUST00000174914 89 ntBASIC31.43■■■□□ 2.62
Brat1Q8C3R1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.42■■■□□ 2.62
Brat1Q8C3R1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.38■■■□□ 2.61
Brat1Q8C3R1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Brat1Q8C3R1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Brat1Q8C3R1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Brat1Q8C3R1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Brat1Q8C3R1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.11■■■□□ 2.57
Brat1Q8C3R1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Brat1Q8C3R1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Brat1Q8C3R1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Brat1Q8C3R1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Brat1Q8C3R1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Brat1Q8C3R1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.92■■■□□ 2.54
Brat1Q8C3R1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Brat1Q8C3R1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.88■■■□□ 2.53
Brat1Q8C3R1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
Brat1Q8C3R1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Brat1Q8C3R1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Brat1Q8C3R1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.8■■■□□ 2.52
Brat1Q8C3R1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.68■■■□□ 2.5
Brat1Q8C3R1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Brat1Q8C3R1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Brat1Q8C3R1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Brat1Q8C3R1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
Brat1Q8C3R1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Brat1Q8C3R1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.54■■■□□ 2.48
Brat1Q8C3R1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Brat1Q8C3R1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Brat1Q8C3R1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Brat1Q8C3R1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.47■■■□□ 2.47
Brat1Q8C3R1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Brat1Q8C3R1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Brat1Q8C3R1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.34■■■□□ 2.45
Brat1Q8C3R1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
Brat1Q8C3R1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Brat1Q8C3R1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Brat1Q8C3R1 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.24■■■□□ 2.43
Brat1Q8C3R1 Rab21-202ENSMUST00000218831 843 ntBASIC30.16■■■□□ 2.42
Brat1Q8C3R1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Brat1Q8C3R1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.14■■■□□ 2.42
Brat1Q8C3R1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Brat1Q8C3R1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Brat1Q8C3R1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.03■■■□□ 2.4
Brat1Q8C3R1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Brat1Q8C3R1 Gm25262-201ENSMUST00000174934 133 ntBASIC29.95■■■□□ 2.39
Brat1Q8C3R1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Brat1Q8C3R1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Brat1Q8C3R1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Brat1Q8C3R1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Brat1Q8C3R1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Brat1Q8C3R1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.8■■■□□ 2.36
Brat1Q8C3R1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Brat1Q8C3R1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Brat1Q8C3R1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.73■■■□□ 2.35
Brat1Q8C3R1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Brat1Q8C3R1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Brat1Q8C3R1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Brat1Q8C3R1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Brat1Q8C3R1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Brat1Q8C3R1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms