RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Rpgrip1Q9EPQ2 1331 aa30.72■■■□□ 2.51
Trim71-201ENSMUST00000111816 Cngb1E1AZ71 1325 aa30.71■■■□□ 2.51
Trim71-201ENSMUST00000111816 Rhox8Q6VSS7 320 aa30.58■■■□□ 2.49
Trim71-201ENSMUST00000111816 Las1lA2BE28 776 aaKnown RBP30.57■■■□□ 2.48
Trim71-201ENSMUST00000111816 Pelp1Q9DBD5 1123 aaKnown RBP30.26■■■□□ 2.43
Trim71-201ENSMUST00000111816 Amer1Q7TS75 1132 aa29.14■■■□□ 2.25
Trim71-201ENSMUST00000111816 4930567H17RikQ3V0K5 233 aa28.71■■■□□ 2.19
Trim71-201ENSMUST00000111816 Wdr66E9Q743 1299 aa28.68■■■□□ 2.18
Trim71-201ENSMUST00000111816 CenpbP27790 599 aa28.58■■■□□ 2.17
Trim71-201ENSMUST00000111816 Myt1Q8CFC2 1127 aa28.57■■■□□ 2.16
Trim71-201ENSMUST00000111816 Ehmt2Q9Z148 1263 aaKnown RBP27.92■■■□□ 2.06
Trim71-201ENSMUST00000111816 Ube2uB1AUC4 352 aa27.91■■■□□ 2.06
Trim71-201ENSMUST00000111816 Zeb1Q64318 1117 aa27.74■■■□□ 2.03
Trim71-201ENSMUST00000111816 Stra8P70278 393 aa27.73■■■□□ 2.03
Trim71-201ENSMUST00000111816 Ttbk1Q6PCN3 1308 aa27.55■■■□□ 2
Trim71-201ENSMUST00000111816 4933416C03RikQ3V063 378 aa27.33■■□□□ 1.97
Trim71-201ENSMUST00000111816 Rtl1Q7M732 1744 aa27.25■■□□□ 1.95
Trim71-201ENSMUST00000111816 DiexfQ8BTT6 772 aaKnown RBP27.2■■□□□ 1.94
Trim71-201ENSMUST00000111816 Rtl5Q5DTT4 599 aa27.11■■□□□ 1.93
Trim71-201ENSMUST00000111816 Esf1Q3V1V3 845 aaKnown RBP27.03■■□□□ 1.92
Trim71-201ENSMUST00000111816 Acin1Q9JIX8 1338 aaKnown RBP26.92■■□□□ 1.9
Trim71-201ENSMUST00000111816 NefmP08553 848 aa26.84■■□□□ 1.89
Trim71-201ENSMUST00000111816 Tnnt3Q9QZ47 272 aa26.84■■□□□ 1.89
Trim71-201ENSMUST00000111816 Npm2Q80W85 207 aa26.82■■□□□ 1.88
Trim71-201ENSMUST00000111816 NeflP08551 543 aa26.76■■□□□ 1.87
Trim71-201ENSMUST00000111816 Slc24a1Q91WD8 1130 aa26.7■■□□□ 1.87
Trim71-201ENSMUST00000111816 Ythdc1E9Q5K9 736 aaKnown RBP26.66■■□□□ 1.86
Trim71-201ENSMUST00000111816 Ccdc180J3QNE4 1664 aa26.66■■□□□ 1.86
Trim71-201ENSMUST00000111816 Cdk11bP24788 784 aaKnown RBP26.61■■□□□ 1.85
Trim71-201ENSMUST00000111816 Ccdc136Q3TVA9 1136 aa26.56■■□□□ 1.84
Trim71-201ENSMUST00000111816 Anp32bQ9EST5 272 aaKnown RBP26.52■■□□□ 1.84
Trim71-201ENSMUST00000111816 Gab3Q8BSM5 595 aa26.46■■□□□ 1.83
Trim71-201ENSMUST00000111816 Trim41Q5NCC3 630 aa26.43■■□□□ 1.82
Trim71-201ENSMUST00000111816 Myt1lP97500 1187 aa26.42■■□□□ 1.82
Trim71-201ENSMUST00000111816 NrdcQ8BHG1 1161 aa26.36■■□□□ 1.81
Trim71-201ENSMUST00000111816 HrcG5E8J6 738 aa26.2■■□□□ 1.78
Trim71-201ENSMUST00000111816 Pcgf6Q99NA9 353 aa26.14■■□□□ 1.78
Trim71-201ENSMUST00000111816 UbtfP25976 765 aaKnown RBP26.06■■□□□ 1.76
Trim71-201ENSMUST00000111816 Nop58Q6DFW4 536 aaKnown RBP26.05■■□□□ 1.76
Trim71-201ENSMUST00000111816 DaxxO35613 739 aa25.92■■□□□ 1.74
Trim71-201ENSMUST00000111816 Eif5bQ05D44 1216 aaKnown RBP25.84■■□□□ 1.73
Trim71-201ENSMUST00000111816 CatipB9EKE5 520 aa25.84■■□□□ 1.73
Trim71-201ENSMUST00000111816 Anp32aO35381 247 aa25.81■■□□□ 1.72
Trim71-201ENSMUST00000111816 NclP09405 707 aaKnown RBP25.74■■□□□ 1.71
Trim71-201ENSMUST00000111816 Ccdc9Q8VC31 543 aaKnown RBP25.7■■□□□ 1.7
Trim71-201ENSMUST00000111816 Os9Q8K2C7 672 aa25.61■■□□□ 1.69
Trim71-201ENSMUST00000111816 Neurod1Q60867 357 aa25.41■■□□□ 1.66
Trim71-201ENSMUST00000111816 Fam50aQ9WV03 339 aaKnown RBP25.34■■□□□ 1.65
Trim71-201ENSMUST00000111816 Upf2A2AT37 1269 aaKnown RBP25.28■■□□□ 1.64
Trim71-201ENSMUST00000111816 TonslQ6NZL6 1363 aa25.24■■□□□ 1.63
Trim71-201ENSMUST00000111816 Supt5hO55201 1082 aaKnown RBP25.23■■□□□ 1.63
Trim71-201ENSMUST00000111816 Lmod3E9QA62 571 aa25.17■■□□□ 1.62
Trim71-201ENSMUST00000111816 Aplp2Q06335 707 aa25.07■■□□□ 1.6
Trim71-201ENSMUST00000111816 Hsp90aa1P07901 733 aaKnown RBP25.06■■□□□ 1.6
Trim71-201ENSMUST00000111816 ClspnQ80YR7 1315 aa24.97■■□□□ 1.59
Trim71-201ENSMUST00000111816 Trim44Q9QXA7 346 aa24.91■■□□□ 1.58
Trim71-201ENSMUST00000111816 NischQ80TM9 1593 aa24.87■■□□□ 1.57
Trim71-201ENSMUST00000111816 Anks4bQ8K3X6 423 aa24.84■■□□□ 1.57
Trim71-201ENSMUST00000111816 Nlrp6Q91WS2 869 aa24.84■■□□□ 1.57
Trim71-201ENSMUST00000111816 Tnnt2P50752 301 aa24.76■■□□□ 1.55
Trim71-201ENSMUST00000111816 ArxO35085 564 aa24.72■■□□□ 1.55
Trim71-201ENSMUST00000111816 Ppargc1bQ8VHJ7 1014 aa24.72■■□□□ 1.55
Trim71-201ENSMUST00000111816 Csrnp3P59055 597 aa24.69■■□□□ 1.54
Trim71-201ENSMUST00000111816 Adam1bQ8R534 806 aa24.69■■□□□ 1.54
Trim71-201ENSMUST00000111816 Il27Q8K3I6 234 aa24.68■■□□□ 1.54
Trim71-201ENSMUST00000111816 Hdac5Q9Z2V6 1113 aa24.67■■□□□ 1.54
Trim71-201ENSMUST00000111816 Polr3glQ8R0C0 218 aa24.66■■□□□ 1.54
Trim71-201ENSMUST00000111816 Ap3b1Q9Z1T1 1105 aa24.66■■□□□ 1.54
Trim71-201ENSMUST00000111816 Bcl11aQ9QYE3 773 aa24.6■■□□□ 1.53
Trim71-201ENSMUST00000111816 DekQ7TNV0 380 aaKnown RBP24.59■■□□□ 1.53
Trim71-201ENSMUST00000111816 Gm13697A2AK42 830 aa24.5■■□□□ 1.51
Trim71-201ENSMUST00000111816 Calr4Q3TQS0 420 aa24.46■■□□□ 1.51
Trim71-201ENSMUST00000111816 Ccdc27Q3V036 639 aa24.45■■□□□ 1.5
Trim71-201ENSMUST00000111816 Chic1Q8CBW7 227 aa24.43■■□□□ 1.5
Trim71-201ENSMUST00000111816 Ppp4r2Q0VGB7 417 aa24.41■■□□□ 1.5
Trim71-201ENSMUST00000111816 Irx3P81067 507 aa24.39■■□□□ 1.49
Trim71-201ENSMUST00000111816 Wdr43Q6ZQL4 677 aaKnown RBP24.38■■□□□ 1.49
Trim71-201ENSMUST00000111816 Hnrnpul2Q00PI9 745 aaKnown RBP24.35■■□□□ 1.49
Trim71-201ENSMUST00000111816 Htatsf1Q8BGC0 757 aa24.35■■□□□ 1.49
Trim71-201ENSMUST00000111816 Gm38655A0A286YDK6 273 aa24.31■■□□□ 1.48
Trim71-201ENSMUST00000111816 Mier1Q5UAK0 511 aa24.3■■□□□ 1.48
Trim71-201ENSMUST00000111816 PtmaP26350 111 aa24.29■■□□□ 1.48
Trim71-201ENSMUST00000111816 Atp1b4Q99ME6 356 aa24.28■■□□□ 1.48
Trim71-201ENSMUST00000111816 Znf326O88291 580 aa24.27■■□□□ 1.48
Trim71-201ENSMUST00000111816 Znf316Q6PGE4 1016 aa24.21■■□□□ 1.47
Trim71-201ENSMUST00000111816 Calcoco2A2A6M5 331 aa24.21■■□□□ 1.47
Trim71-201ENSMUST00000111816 Zbtb7cQ8VCZ7 619 aa24.2■■□□□ 1.46
Trim71-201ENSMUST00000111816 Gm13695A2AK44 830 aa24.17■■□□□ 1.46
Trim71-201ENSMUST00000111816 AU015836B2RUM3 263 aa24.16■■□□□ 1.46
Trim71-201ENSMUST00000111816 Vsig10D3YX43 558 aa24.16■■□□□ 1.46
Trim71-201ENSMUST00000111816 CanxP35564 591 aaKnown RBP24.13■■□□□ 1.45
Trim71-201ENSMUST00000111816 Erich6D3Z6S9 713 aa24.13■■□□□ 1.45
Trim71-201ENSMUST00000111816 SetQ9EQU5 289 aaKnown RBP24.11■■□□□ 1.45
Trim71-201ENSMUST00000111816 Hsp90ab1P11499 724 aaKnown RBP24.08■■□□□ 1.45
Trim71-201ENSMUST00000111816 Map7d2A2AG50 781 aa24.08■■□□□ 1.45
Trim71-201ENSMUST00000111816 Mak16Q8BGS0 296 aaKnown RBP24.07■■□□□ 1.44
Trim71-201ENSMUST00000111816 PnnO35691 725 aaKnown RBP24.05■■□□□ 1.44
Trim71-201ENSMUST00000111816 Fgd1P52734 960 aa24.02■■□□□ 1.44
Trim71-201ENSMUST00000111816 Zbtb4Q5F293 982 aa24.02■■□□□ 1.44
Trim71-201ENSMUST00000111816 Fam71e1A1L3C1 212 aa24.01■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms