RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Rpgrip1Q9EPQ2 1331 aa30,72■■■□□ 2,51
Trim71-201ENSMUST00000111816 Cngb1E1AZ71 1325 aa30,71■■■□□ 2,51
Trim71-201ENSMUST00000111816 Rhox8Q6VSS7 320 aa30,58■■■□□ 2,49
Trim71-201ENSMUST00000111816 Las1lA2BE28 776 aaKnown RBP30,57■■■□□ 2,48
Trim71-201ENSMUST00000111816 Pelp1Q9DBD5 1123 aaKnown RBP30,26■■■□□ 2,43
Trim71-201ENSMUST00000111816 Amer1Q7TS75 1132 aa29,14■■■□□ 2,25
Trim71-201ENSMUST00000111816 4930567H17RikQ3V0K5 233 aa28,71■■■□□ 2,19
Trim71-201ENSMUST00000111816 Wdr66E9Q743 1299 aa28,68■■■□□ 2,18
Trim71-201ENSMUST00000111816 CenpbP27790 599 aa28,58■■■□□ 2,17
Trim71-201ENSMUST00000111816 Myt1Q8CFC2 1127 aa28,57■■■□□ 2,16
Trim71-201ENSMUST00000111816 Ehmt2Q9Z148 1263 aaKnown RBP27,92■■■□□ 2,06
Trim71-201ENSMUST00000111816 Ube2uB1AUC4 352 aa27,91■■■□□ 2,06
Trim71-201ENSMUST00000111816 Zeb1Q64318 1117 aa27,74■■■□□ 2,03
Trim71-201ENSMUST00000111816 Stra8P70278 393 aa27,73■■■□□ 2,03
Trim71-201ENSMUST00000111816 Ttbk1Q6PCN3 1308 aa27,55■■■□□ 2
Trim71-201ENSMUST00000111816 4933416C03RikQ3V063 378 aa27,33■■□□□ 1,97
Trim71-201ENSMUST00000111816 Rtl1Q7M732 1744 aa27,25■■□□□ 1,95
Trim71-201ENSMUST00000111816 DiexfQ8BTT6 772 aaKnown RBP27,2■■□□□ 1,94
Trim71-201ENSMUST00000111816 Rtl5Q5DTT4 599 aa27,11■■□□□ 1,93
Trim71-201ENSMUST00000111816 Esf1Q3V1V3 845 aaKnown RBP27,03■■□□□ 1,92
Trim71-201ENSMUST00000111816 Acin1Q9JIX8 1338 aaKnown RBP26,92■■□□□ 1,9
Trim71-201ENSMUST00000111816 NefmP08553 848 aa26,84■■□□□ 1,89
Trim71-201ENSMUST00000111816 Tnnt3Q9QZ47 272 aa26,84■■□□□ 1,89
Trim71-201ENSMUST00000111816 Npm2Q80W85 207 aa26,82■■□□□ 1,88
Trim71-201ENSMUST00000111816 NeflP08551 543 aa26,76■■□□□ 1,87
Trim71-201ENSMUST00000111816 Slc24a1Q91WD8 1130 aa26,7■■□□□ 1,87
Trim71-201ENSMUST00000111816 Ythdc1E9Q5K9 736 aaKnown RBP26,66■■□□□ 1,86
Trim71-201ENSMUST00000111816 Ccdc180J3QNE4 1664 aa26,66■■□□□ 1,86
Trim71-201ENSMUST00000111816 Cdk11bP24788 784 aaKnown RBP26,61■■□□□ 1,85
Trim71-201ENSMUST00000111816 Ccdc136Q3TVA9 1136 aa26,56■■□□□ 1,84
Trim71-201ENSMUST00000111816 Anp32bQ9EST5 272 aaKnown RBP26,52■■□□□ 1,84
Trim71-201ENSMUST00000111816 Gab3Q8BSM5 595 aa26,46■■□□□ 1,83
Trim71-201ENSMUST00000111816 Trim41Q5NCC3 630 aa26,43■■□□□ 1,82
Trim71-201ENSMUST00000111816 Myt1lP97500 1187 aa26,42■■□□□ 1,82
Trim71-201ENSMUST00000111816 NrdcQ8BHG1 1161 aa26,36■■□□□ 1,81
Trim71-201ENSMUST00000111816 HrcG5E8J6 738 aa26,2■■□□□ 1,78
Trim71-201ENSMUST00000111816 Pcgf6Q99NA9 353 aa26,14■■□□□ 1,78
Trim71-201ENSMUST00000111816 UbtfP25976 765 aaKnown RBP26,06■■□□□ 1,76
Trim71-201ENSMUST00000111816 Nop58Q6DFW4 536 aaKnown RBP26,05■■□□□ 1,76
Trim71-201ENSMUST00000111816 DaxxO35613 739 aa25,92■■□□□ 1,74
Trim71-201ENSMUST00000111816 Eif5bQ05D44 1216 aaKnown RBP25,84■■□□□ 1,73
Trim71-201ENSMUST00000111816 CatipB9EKE5 520 aa25,84■■□□□ 1,73
Trim71-201ENSMUST00000111816 Anp32aO35381 247 aa25,81■■□□□ 1,72
Trim71-201ENSMUST00000111816 NclP09405 707 aaKnown RBP25,74■■□□□ 1,71
Trim71-201ENSMUST00000111816 Ccdc9Q8VC31 543 aaKnown RBP25,7■■□□□ 1,7
Trim71-201ENSMUST00000111816 Os9Q8K2C7 672 aa25,61■■□□□ 1,69
Trim71-201ENSMUST00000111816 Neurod1Q60867 357 aa25,41■■□□□ 1,66
Trim71-201ENSMUST00000111816 Fam50aQ9WV03 339 aaKnown RBP25,34■■□□□ 1,65
Trim71-201ENSMUST00000111816 Upf2A2AT37 1269 aaKnown RBP25,28■■□□□ 1,64
Trim71-201ENSMUST00000111816 TonslQ6NZL6 1363 aa25,24■■□□□ 1,63
Trim71-201ENSMUST00000111816 Supt5hO55201 1082 aaKnown RBP25,23■■□□□ 1,63
Trim71-201ENSMUST00000111816 Lmod3E9QA62 571 aa25,17■■□□□ 1,62
Trim71-201ENSMUST00000111816 Aplp2Q06335 707 aa25,07■■□□□ 1,6
Trim71-201ENSMUST00000111816 Hsp90aa1P07901 733 aaKnown RBP25,06■■□□□ 1,6
Trim71-201ENSMUST00000111816 ClspnQ80YR7 1315 aa24,97■■□□□ 1,59
Trim71-201ENSMUST00000111816 Trim44Q9QXA7 346 aa24,91■■□□□ 1,58
Trim71-201ENSMUST00000111816 NischQ80TM9 1593 aa24,87■■□□□ 1,57
Trim71-201ENSMUST00000111816 Anks4bQ8K3X6 423 aa24,84■■□□□ 1,57
Trim71-201ENSMUST00000111816 Nlrp6Q91WS2 869 aa24,84■■□□□ 1,57
Trim71-201ENSMUST00000111816 Tnnt2P50752 301 aa24,76■■□□□ 1,55
Trim71-201ENSMUST00000111816 ArxO35085 564 aa24,72■■□□□ 1,55
Trim71-201ENSMUST00000111816 Ppargc1bQ8VHJ7 1014 aa24,72■■□□□ 1,55
Trim71-201ENSMUST00000111816 Csrnp3P59055 597 aa24,69■■□□□ 1,54
Trim71-201ENSMUST00000111816 Adam1bQ8R534 806 aa24,69■■□□□ 1,54
Trim71-201ENSMUST00000111816 Il27Q8K3I6 234 aa24,68■■□□□ 1,54
Trim71-201ENSMUST00000111816 Hdac5Q9Z2V6 1113 aa24,67■■□□□ 1,54
Trim71-201ENSMUST00000111816 Polr3glQ8R0C0 218 aa24,66■■□□□ 1,54
Trim71-201ENSMUST00000111816 Ap3b1Q9Z1T1 1105 aa24,66■■□□□ 1,54
Trim71-201ENSMUST00000111816 Bcl11aQ9QYE3 773 aa24,6■■□□□ 1,53
Trim71-201ENSMUST00000111816 DekQ7TNV0 380 aaKnown RBP24,59■■□□□ 1,53
Trim71-201ENSMUST00000111816 Gm13697A2AK42 830 aa24,5■■□□□ 1,51
Trim71-201ENSMUST00000111816 Calr4Q3TQS0 420 aa24,46■■□□□ 1,51
Trim71-201ENSMUST00000111816 Ccdc27Q3V036 639 aa24,45■■□□□ 1,5
Trim71-201ENSMUST00000111816 Chic1Q8CBW7 227 aa24,43■■□□□ 1,5
Trim71-201ENSMUST00000111816 Ppp4r2Q0VGB7 417 aa24,41■■□□□ 1,5
Trim71-201ENSMUST00000111816 Irx3P81067 507 aa24,39■■□□□ 1,49
Trim71-201ENSMUST00000111816 Wdr43Q6ZQL4 677 aaKnown RBP24,38■■□□□ 1,49
Trim71-201ENSMUST00000111816 Hnrnpul2Q00PI9 745 aaKnown RBP24,35■■□□□ 1,49
Trim71-201ENSMUST00000111816 Htatsf1Q8BGC0 757 aa24,35■■□□□ 1,49
Trim71-201ENSMUST00000111816 Gm38655A0A286YDK6 273 aa24,31■■□□□ 1,48
Trim71-201ENSMUST00000111816 Mier1Q5UAK0 511 aa24,3■■□□□ 1,48
Trim71-201ENSMUST00000111816 PtmaP26350 111 aa24,29■■□□□ 1,48
Trim71-201ENSMUST00000111816 Atp1b4Q99ME6 356 aa24,28■■□□□ 1,48
Trim71-201ENSMUST00000111816 Znf326O88291 580 aa24,27■■□□□ 1,48
Trim71-201ENSMUST00000111816 Znf316Q6PGE4 1016 aa24,21■■□□□ 1,47
Trim71-201ENSMUST00000111816 Calcoco2A2A6M5 331 aa24,21■■□□□ 1,47
Trim71-201ENSMUST00000111816 Zbtb7cQ8VCZ7 619 aa24,2■■□□□ 1,46
Trim71-201ENSMUST00000111816 Gm13695A2AK44 830 aa24,17■■□□□ 1,46
Trim71-201ENSMUST00000111816 AU015836B2RUM3 263 aa24,16■■□□□ 1,46
Trim71-201ENSMUST00000111816 Vsig10D3YX43 558 aa24,16■■□□□ 1,46
Trim71-201ENSMUST00000111816 CanxP35564 591 aaKnown RBP24,13■■□□□ 1,45
Trim71-201ENSMUST00000111816 Erich6D3Z6S9 713 aa24,13■■□□□ 1,45
Trim71-201ENSMUST00000111816 SetQ9EQU5 289 aaKnown RBP24,11■■□□□ 1,45
Trim71-201ENSMUST00000111816 Hsp90ab1P11499 724 aaKnown RBP24,08■■□□□ 1,45
Trim71-201ENSMUST00000111816 Map7d2A2AG50 781 aa24,08■■□□□ 1,45
Trim71-201ENSMUST00000111816 Mak16Q8BGS0 296 aaKnown RBP24,07■■□□□ 1,44
Trim71-201ENSMUST00000111816 PnnO35691 725 aaKnown RBP24,05■■□□□ 1,44
Trim71-201ENSMUST00000111816 Fgd1P52734 960 aa24,02■■□□□ 1,44
Trim71-201ENSMUST00000111816 Zbtb4Q5F293 982 aa24,02■■□□□ 1,44
Trim71-201ENSMUST00000111816 Fam71e1A1L3C1 212 aa24,01■■□□□ 1,43
Retrieved 100 of 22,080 RNA–protein pairs in 10 ms