RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 WDR93Q6P2C0 686 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 NEK10Q6ZWH5 1172 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 RHOUQ7L0Q8 258 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 RRM2BQ7LG56 351 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TMEM132CQ8N3T6 1108 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SLC44A3Q8N4M1 653 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SIRT6Q8N6T7 355 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ANKRD52Q8NB46 1076 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 BEND2Q8NDZ0 799 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SRFBP1Q8NEF9 429 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 DEFB124Q8NES8 71 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SPATA3Q8NHX4 192 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ETNPPLQ8TBG4 499 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ADAMTS15Q8TE58 950 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 OVCA2Q8WZ82 227 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SMARCE1Q969G3 411 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 JAKMIP2Q96AA8 810 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CLDN23Q96B33 292 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 ARRDC3Q96B67 414 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 KTI12Q96EK9 354 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 MCRS1Q96EZ8 462 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 FBXL20Q96IG2 436 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 HS6ST2Q96MM7 605 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 OSBPL9Q96SU4 736 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 MPHOSPH8Q99549 860 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 EDEM2Q9BV94 578 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 MAK16Q9BXY0 300 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 SLC29A3Q9BZD2 475 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CLPBQ9H078 707 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SPATC1LQ9H0A9 340 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 INTS2Q9H0H0 1204 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 SMARCAD1Q9H4L7 1026 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 STN1Q9H668 368 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 SYNCQ9H7C4 482 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PDE11AQ9HCR9 933 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 DDX4Q9NQI0 724 aaKnown RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 SNX15Q9NRS6 342 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TBCCD1Q9NVR7 557 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 NSMCE4AQ9NXX6 385 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 TAS2R10Q9NYW0 307 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 CTTNBP2NLQ9P2B4 639 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 MGAT4CQ9UBM8 478 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PLEKHB1Q9UF11 243 aaPredicted RBP2.48□□□□□ -2.01
CALD1-216ENST00000473714 TMEM5Q9Y2B1 443 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 SSX2IPQ9Y2D8 614 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 PCDHB2Q9Y5E7 798 aa2.48□□□□□ -2.01
CALD1-216ENST00000473714 EML5Q05BV3 1969 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 A0A1W2PS29 197 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SYNDIG1LA6NDD5 238 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 OR2W5A6NFC9 320 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 MBD3L5A6NJ08 208 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 TTC36A6NLP5 189 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SLC38A8A6NNN8 435 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TTC34A8MYJ7 566 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TMEM232C9JQI7 657 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PTGES3LE9PB15 166 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 M0QYT0 321 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 AGPSO00116 658 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 AP4M1O00189 453 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 QSOX1O00391 747 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SLC16A3O15427 465 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 ORC4O43929 436 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TULP3O75386 442 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 NCR1O76036 304 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 CDKL5O76039 1030 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 CCNDBP1O95273 360 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 C1RP00736 705 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ALDOAP04075 364 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CSF1RP07333 972 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ASNSP08243 561 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 MMP3P08254 477 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ACADMP11310 421 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PEPDP12955 493 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 KRT10P13645 584 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 GATA3P23771 443 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 RRM1P23921 792 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 DDX6P26196 483 aaKnown RBP eCLIP2.47□□□□□ -2.01
CALD1-216ENST00000473714 ACTN2P35609 894 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PPARGP37231 505 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 PNPLA4P41247 253 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 GPD2P43304 727 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 RAD52P43351 418 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 HARS2P49590 506 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CLCN2P51788 898 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ELLP55199 621 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 SIM1P81133 766 aaPredicted RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 TXNL4AP83876 142 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CCDC15Q0P6D6 951 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 LRMPQ12912 555 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 CHAF1BQ13112 559 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 SRSF5Q13243 272 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 CUL4AQ13619 759 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ALKBH1Q13686 389 aaKnown RBP2.47□□□□□ -2.01
CALD1-216ENST00000473714 ERV3-1Q14264 604 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ACOX1Q15067 660 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 BAK1Q16611 211 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 ERCC6LQ2NKX8 1250 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D25Q3MII6 688 aa2.47□□□□□ -2.01
CALD1-216ENST00000473714 PLAC9Q5JTB6 97 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms