RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Casc4Q6P2L7 435 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 BckdhbQ6P3A8 390 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Kif26bQ7TNC6 2112 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Gtf3c4Q8BMQ2 817 aaKnown RBP15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Rmdn2Q8BSE0 410 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Ttc34Q8C0Q3 554 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 PolbQ8K409 335 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Gle1Q8R322 699 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Mospd1Q8VEL0 213 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 ApofQ91V80 315 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Lrp8Q924X6 996 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 AasdhpptQ9CQF6 309 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Rec114Q9CWH4 259 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 CrotQ9DC50 612 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Rcan3Q9JKK0 239 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 CtsmQ9JL96 333 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Gpc1Q9QZF2 557 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Vmn1r49Q9WUF1 310 aa15.42■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 KalrnA2CG49 2964 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Btbd18A0A0A6YY25 723 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Actl10A2AKE7 346 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 MipepA6H611 711 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 SelenovD3YXG1 328 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Zfp780bE9Q2S6 806 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Zbtb10E9Q8X5 861 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Psma3O70435 255 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Tmco2P0C1V4 183 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Pdha1P35486 390 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Defa-rs7P50715 91 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Hsd17b2P51658 381 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Dynlt1P51807 113 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Ccna2P51943 422 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Clec4fP70194 548 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 ElocP83940 112 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Pde1bQ01065 535 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Srsf6Q3TWW8 339 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Esrp1Q3US41 680 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Ubtfl1Q3USZ2 394 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 PtprnQ60673 979 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cyp1b1Q64429 543 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Muc19Q6JHY2 733 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Kyat3Q71RI9 455 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Naa15Q80UM3 865 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 SgtaQ8BJU0 315 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Fbxo48Q8CAT8 161 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cep57Q8CEE0 500 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Pkn3Q8K045 878 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 ZwilchQ8R060 589 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Mtfr2Q8VED8 361 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Dnajc3Q91YW3 504 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Sytl1Q99N80 567 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Bbs2Q9CWF6 721 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 L3hypdhQ9CXA2 354 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Ppil1Q9D0W5 166 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Anxa9Q9JHQ0 345 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Rpf2Q9JJ80 306 aaKnown RBP15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 NagaQ9QWR8 415 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Mbd4Q9Z2D7 554 aa15.41■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Prob1A0A087WR45 1010 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Tbc1d25A1A5B6 742 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Apba1B2RUJ5 842 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Vmn2r34E9PVI0 852 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cdh19E9Q3A7 770 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Vmn2r37F8VQD3 802 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Pja1O55176 578 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Tgfbr3O88393 850 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Tnfrsf17O88472 185 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Srp54P14576 504 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cyp2a4P15392 494 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cyp2a5P20852 494 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Hnf1bP27889 558 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Ptger4P32240 513 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Epas1P97481 874 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 CrtamQ149L7 389 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 CiartQ3TQ03 375 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Trip13Q3UA06 432 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 LchnQ3UHG7 455 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Afap1l2Q5DTU0 825 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Adam9Q61072 845 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 CcncQ62447 283 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Nemp1Q6ZQE4 437 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Trpm4Q7TN37 1213 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Clec18aQ7TSQ1 534 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Washc5Q8C2E7 1159 aaKnown RBP15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Tldc1Q8K0P3 455 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cys1Q8R4T1 145 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Olfr722Q8VFC8 308 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 DcxrQ91X52 244 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Nrif1Q923B3 828 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Spata17Q9D552 379 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Atp6v1e2Q9D593 226 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Cldn19Q9ET38 224 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Dnajb8Q9QYI7 227 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 PnckQ9QYK9 343 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 VcanQ62059 3357 aa15.4■□□□□ 0.06
Hmgb1-208ENSMUST00000139443 Wdr49A0A0N4SUK7 710 aa15.39■□□□□ 0.05
Hmgb1-208ENSMUST00000139443 Susd5G3UW60 619 aa15.39■□□□□ 0.05
Hmgb1-208ENSMUST00000139443 Vmn2r65G3X931 845 aa15.39■□□□□ 0.05
Hmgb1-208ENSMUST00000139443 Hoxa4P06798 285 aa15.39■□□□□ 0.05
Hmgb1-208ENSMUST00000139443 Ap2m1P84091 435 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms