Protein–RNA interactions for Protein: Q3USZ2

Ubtfl1, Upstream-binding factor 1-like protein 1, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubtfl1Q3USZ2 Gm25239-201ENSMUST00000174915 86 ntBASIC37.7■■■■□ 3.63
Ubtfl1Q3USZ2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Ubtfl1Q3USZ2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Ubtfl1Q3USZ2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Ubtfl1Q3USZ2 Gm24109-201ENSMUST00000175489 103 ntBASIC32.89■■■□□ 2.86
Ubtfl1Q3USZ2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ubtfl1Q3USZ2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.63■■■□□ 2.81
Ubtfl1Q3USZ2 Gm15042-201ENSMUST00000120212 883 ntBASIC32.61■■■□□ 2.81
Ubtfl1Q3USZ2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Ubtfl1Q3USZ2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ubtfl1Q3USZ2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ubtfl1Q3USZ2 Gm15045-201ENSMUST00000117359 883 ntBASIC31.76■■■□□ 2.67
Ubtfl1Q3USZ2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ubtfl1Q3USZ2 Gm23366-201ENSMUST00000175022 89 ntBASIC31.46■■■□□ 2.63
Ubtfl1Q3USZ2 Psd-208ENSMUST00000224556 2034 ntBASIC31.45■■■□□ 2.63
Ubtfl1Q3USZ2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ubtfl1Q3USZ2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ubtfl1Q3USZ2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.81■■■□□ 2.52
Ubtfl1Q3USZ2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.79■■■□□ 2.52
Ubtfl1Q3USZ2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ubtfl1Q3USZ2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
Ubtfl1Q3USZ2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.48■■■□□ 2.47
Ubtfl1Q3USZ2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ubtfl1Q3USZ2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ubtfl1Q3USZ2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ubtfl1Q3USZ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ubtfl1Q3USZ2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ubtfl1Q3USZ2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ubtfl1Q3USZ2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ubtfl1Q3USZ2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ubtfl1Q3USZ2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ubtfl1Q3USZ2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ubtfl1Q3USZ2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Ubtfl1Q3USZ2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ubtfl1Q3USZ2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ubtfl1Q3USZ2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ubtfl1Q3USZ2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ubtfl1Q3USZ2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.93■■■□□ 2.38
Ubtfl1Q3USZ2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.92■■■□□ 2.38
Ubtfl1Q3USZ2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Ubtfl1Q3USZ2 Gm25238-201ENSMUST00000174914 89 ntBASIC29.85■■■□□ 2.37
Ubtfl1Q3USZ2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Ubtfl1Q3USZ2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ubtfl1Q3USZ2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ubtfl1Q3USZ2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.61■■■□□ 2.33
Ubtfl1Q3USZ2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ubtfl1Q3USZ2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ubtfl1Q3USZ2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Ubtfl1Q3USZ2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ubtfl1Q3USZ2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
Ubtfl1Q3USZ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ubtfl1Q3USZ2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Ubtfl1Q3USZ2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.01■■■□□ 2.23
Ubtfl1Q3USZ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
Ubtfl1Q3USZ2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.91■■■□□ 2.22
Ubtfl1Q3USZ2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.9■■■□□ 2.22
Ubtfl1Q3USZ2 Gm25262-201ENSMUST00000174934 133 ntBASIC28.84■■■□□ 2.21
Ubtfl1Q3USZ2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Ubtfl1Q3USZ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.83■■■□□ 2.21
Ubtfl1Q3USZ2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Ubtfl1Q3USZ2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.79■■■□□ 2.2
Ubtfl1Q3USZ2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ubtfl1Q3USZ2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ubtfl1Q3USZ2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ubtfl1Q3USZ2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.63■■■□□ 2.17
Ubtfl1Q3USZ2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ubtfl1Q3USZ2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ubtfl1Q3USZ2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ubtfl1Q3USZ2 Gm27325-201ENSMUST00000175467 74 ntBASIC28.47■■■□□ 2.15
Ubtfl1Q3USZ2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ubtfl1Q3USZ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ubtfl1Q3USZ2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.36■■■□□ 2.13
Ubtfl1Q3USZ2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ubtfl1Q3USZ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.33■■■□□ 2.13
Ubtfl1Q3USZ2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ubtfl1Q3USZ2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.28■■■□□ 2.12
Ubtfl1Q3USZ2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.27■■■□□ 2.12
Ubtfl1Q3USZ2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
Ubtfl1Q3USZ2 Gm26115-201ENSMUST00000175605 87 ntBASIC28.26■■■□□ 2.11
Ubtfl1Q3USZ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
Ubtfl1Q3USZ2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ubtfl1Q3USZ2 Rab21-202ENSMUST00000218831 843 ntBASIC28.21■■■□□ 2.11
Ubtfl1Q3USZ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.2■■■□□ 2.1
Ubtfl1Q3USZ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Ubtfl1Q3USZ2 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.19■■■□□ 2.1
Ubtfl1Q3USZ2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
Ubtfl1Q3USZ2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ubtfl1Q3USZ2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Ubtfl1Q3USZ2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ubtfl1Q3USZ2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.12■■■□□ 2.09
Ubtfl1Q3USZ2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ubtfl1Q3USZ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Ubtfl1Q3USZ2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.06■■■□□ 2.08
Ubtfl1Q3USZ2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ubtfl1Q3USZ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ubtfl1Q3USZ2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ubtfl1Q3USZ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ubtfl1Q3USZ2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Ubtfl1Q3USZ2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ubtfl1Q3USZ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.81■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms