Protein–RNA interactions for Protein: P0C1V4

Tmco2, Transmembrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco2P0C1V4 Gm25239-201ENSMUST00000174915 86 ntBASIC37,9■■■■□ 3,66
Tmco2P0C1V4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,2■■■■□ 3,23
Tmco2P0C1V4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34,58■■■■□ 3,13
Tmco2P0C1V4 Gm24109-201ENSMUST00000175489 103 ntBASIC32,99■■■□□ 2,87
Tmco2P0C1V4 Gm15042-201ENSMUST00000120212 883 ntBASIC32,83■■■□□ 2,85
Tmco2P0C1V4 Gm15045-201ENSMUST00000117359 883 ntBASIC32,08■■■□□ 2,73
Tmco2P0C1V4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,96■■■□□ 2,71
Tmco2P0C1V4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Tmco2P0C1V4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,8■■■□□ 2,68
Tmco2P0C1V4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Tmco2P0C1V4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Tmco2P0C1V4 Gm23366-201ENSMUST00000175022 89 ntBASIC31,55■■■□□ 2,64
Tmco2P0C1V4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Tmco2P0C1V4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,91■■■□□ 2,54
Tmco2P0C1V4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,67■■■□□ 2,5
Tmco2P0C1V4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30,67■■■□□ 2,5
Tmco2P0C1V4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,63■■■□□ 2,49
Tmco2P0C1V4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30,54■■■□□ 2,48
Tmco2P0C1V4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Tmco2P0C1V4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,32■■■□□ 2,44
Tmco2P0C1V4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Tmco2P0C1V4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Tmco2P0C1V4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,06■■■□□ 2,4
Tmco2P0C1V4 Gm25238-201ENSMUST00000174914 89 ntBASIC30,02■■■□□ 2,4
Tmco2P0C1V4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Tmco2P0C1V4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,92■■■□□ 2,38
Tmco2P0C1V4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Tmco2P0C1V4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Tmco2P0C1V4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,89■■■□□ 2,38
Tmco2P0C1V4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,66■■■□□ 2,34
Tmco2P0C1V4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,63■■■□□ 2,33
Tmco2P0C1V4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Tmco2P0C1V4 Psd-208ENSMUST00000224556 2034 ntBASIC29,45■■■□□ 2,31
Tmco2P0C1V4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29,25■■■□□ 2,27
Tmco2P0C1V4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,25■■■□□ 2,27
Tmco2P0C1V4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Tmco2P0C1V4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,1■■■□□ 2,25
Tmco2P0C1V4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Tmco2P0C1V4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29,04■■■□□ 2,24
Tmco2P0C1V4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Tmco2P0C1V4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,92■■■□□ 2,22
Tmco2P0C1V4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,92■■■□□ 2,22
Tmco2P0C1V4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,84■■■□□ 2,21
Tmco2P0C1V4 Gm25262-201ENSMUST00000174934 133 ntBASIC28,81■■■□□ 2,2
Tmco2P0C1V4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,7■■■□□ 2,18
Tmco2P0C1V4 Gm27325-201ENSMUST00000175467 74 ntBASIC28,7■■■□□ 2,18
Tmco2P0C1V4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,62■■■□□ 2,17
Tmco2P0C1V4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Tmco2P0C1V4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Tmco2P0C1V4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Tmco2P0C1V4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,45■■■□□ 2,14
Tmco2P0C1V4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Tmco2P0C1V4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28,35■■■□□ 2,13
Tmco2P0C1V4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28,34■■■□□ 2,13
Tmco2P0C1V4 Rab21-202ENSMUST00000218831 843 ntBASIC28,33■■■□□ 2,13
Tmco2P0C1V4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,29■■■□□ 2,12
Tmco2P0C1V4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28,25■■■□□ 2,11
Tmco2P0C1V4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,24■■■□□ 2,11
Tmco2P0C1V4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Tmco2P0C1V4 Gm26115-201ENSMUST00000175605 87 ntBASIC28,19■■■□□ 2,1
Tmco2P0C1V4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,18■■■□□ 2,1
Tmco2P0C1V4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28,17■■■□□ 2,1
Tmco2P0C1V4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28,1■■■□□ 2,09
Tmco2P0C1V4 Gm8109-201ENSMUST00000194076 746 ntBASIC28,1■■■□□ 2,09
Tmco2P0C1V4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Tmco2P0C1V4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,09■■■□□ 2,09
Tmco2P0C1V4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28,09■■■□□ 2,09
Tmco2P0C1V4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,08■■■□□ 2,09
Tmco2P0C1V4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Tmco2P0C1V4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28,02■■■□□ 2,08
Tmco2P0C1V4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,01■■■□□ 2,07
Tmco2P0C1V4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,99■■■□□ 2,07
Tmco2P0C1V4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
Tmco2P0C1V4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Tmco2P0C1V4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Tmco2P0C1V4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Tmco2P0C1V4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Tmco2P0C1V4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,77■■■□□ 2,04
Tmco2P0C1V4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,76■■■□□ 2,03
Tmco2P0C1V4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,75■■■□□ 2,03
Tmco2P0C1V4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Tmco2P0C1V4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,73■■■□□ 2,03
Tmco2P0C1V4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,69■■■□□ 2,02
Tmco2P0C1V4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,67■■■□□ 2,02
Tmco2P0C1V4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,59■■■□□ 2,01
Tmco2P0C1V4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,58■■■□□ 2,01
Tmco2P0C1V4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,49■■□□□ 1,99
Tmco2P0C1V4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,47■■□□□ 1,99
Tmco2P0C1V4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,45■■□□□ 1,98
Tmco2P0C1V4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
Tmco2P0C1V4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Tmco2P0C1V4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27,4■■□□□ 1,98
Tmco2P0C1V4 Gm17082-201ENSMUST00000166043 1091 ntBASIC27,38■■□□□ 1,97
Tmco2P0C1V4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,36■■□□□ 1,97
Tmco2P0C1V4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,34■■□□□ 1,97
Tmco2P0C1V4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27,34■■□□□ 1,97
Tmco2P0C1V4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,32■■□□□ 1,96
Tmco2P0C1V4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27,31■■□□□ 1,96
Tmco2P0C1V4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Tmco2P0C1V4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27,28■■□□□ 1,96
Retrieved 100 of 76,532 protein–RNA pairs in 25,9 ms