RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZNF876PQ49A33 203 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 KCNT1Q5JUK3 1230 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 SYCP2LQ5T4T6 812 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 FOXRED2Q8IWF2 684 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 CCDC146Q8IYE0 955 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 CPXM2Q8N436 756 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 CNBD1Q8NA66 436 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 KLHDC9Q8NEP7 349 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 MAGEC3Q8TD91 643 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 SLC20A1Q8WUM9 679 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 PPM1EQ8WY54 764 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 ZNF583Q96ND8 569 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 CLSTN3Q9BQT9 956 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 TMEM30AQ9NV96 361 aa3.16□□□□□ -1.9
USP8-216ENST00000561206 PDS5AQ29RF7 1337 aaKnown RBP3.16□□□□□ -1.9
USP8-216ENST00000561206 GREB1LQ9C091 1923 aaPredicted RBP3.15□□□□□ -1.9
USP8-216ENST00000561206 ABHD14A-ACY1A0A1B0GW23 586 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 ARHGAP10A1A4S6 786 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 AKR1B15C9JRZ8 316 aaPredicted RBP3.15□□□□□ -1.91
USP8-216ENST00000561206 PLIN1O60240 522 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 FAM155BO75949 473 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 MTA2O94776 668 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 HMGB1P09429 215 aaKnown RBP3.15□□□□□ -1.91
USP8-216ENST00000561206 PAX1P15863 534 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CLCNKAP51800 687 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 BLMHQ13867 455 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 NEDD9Q14511 834 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CTF1Q16619 201 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 EDRF1Q3B7T1 1238 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 MMEL1Q495T6 779 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 FAM83BQ5T0W9 1011 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 ZC2HC1BQ5TFG8 222 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 LCTLQ6UWM7 567 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 C17orf99Q6UX52 265 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 TOGARAM2Q6ZUX3 1019 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 KMT5CQ86Y97 462 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 WDR63Q8IWG1 891 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 C1orf87Q8N0U7 546 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 ADAD2Q8NCV1 583 aaKnown RBP3.15□□□□□ -1.91
USP8-216ENST00000561206 AGBL3Q8NEM8 1001 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CADM4Q8NFZ8 388 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 RND1Q92730 232 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 ZNF524Q96C55 264 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CDCA5Q96FF9 252 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 ZC3HAV1LQ96H79 300 aaKnown RBP3.15□□□□□ -1.91
USP8-216ENST00000561206 KXD1Q9BQD3 176 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 PCGF6Q9BYE7 350 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CHODLQ9H9P2 273 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CNGB3Q9NQW8 809 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 GRHPRQ9UBQ7 328 aa3.15□□□□□ -1.91
USP8-216ENST00000561206 CEP104O60308 925 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 TK1P04183 234 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 PATE4P0C8F1 98 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 VEGFAP15692 232 aaPredicted RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 S1PR1P21453 382 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 YWHAZP63104 245 aaKnown RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 KRT72Q14CN4 511 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 LPAL2Q16609 132 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 TIGD6Q17RP2 521 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 CTXN3Q4LDR2 81 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 CCNYL2Q5T2Q4 361 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 TRNP1Q6NT89 227 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 JMJD6Q6NYC1 403 aaPredicted RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 MOB3CQ70IA8 216 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 NOL8Q76FK4 1167 aaKnown RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 SCCPDHQ8NBX0 429 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 OR10V1Q8NGI7 309 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 CNOT9Q92600 299 aaKnown RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 ABTB1Q969K4 478 aaPredicted RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 SH3KBP1Q96B97 665 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 TWNKQ96RR1 684 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 EPHX3Q9H6B9 360 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 ESRP2Q9H6T0 727 aaKnown RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 DDX4Q9NQI0 724 aaKnown RBP3.14□□□□□ -1.91
USP8-216ENST00000561206 SMYD2Q9NRG4 433 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 GDAQ9Y2T3 454 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 AMDHD2Q9Y303 409 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 DERAQ9Y315 318 aa3.14□□□□□ -1.91
USP8-216ENST00000561206 PER2O15055 1255 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 INHBAP08476 426 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 KRT9P35527 623 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 ADD2P35612 726 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 AARSP49588 968 aaKnown RBP eCLIP3.13□□□□□ -1.91
USP8-216ENST00000561206 CLDN2P57739 230 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 STXBP5Q5T5C0 1151 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 ANKRD54Q6NXT1 300 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 CEACAM20Q6UY09 585 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 ZNF852Q6ZMS4 543 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 MTSS1LQ765P7 747 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 DSELQ8IZU8 1212 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 ZNF248Q8NDW4 579 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 DUSP19Q8WTR2 217 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 MXRA8Q9BRK3 442 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.13□□□□□ -1.91
USP8-216ENST00000561206 SLC32A1Q9H598 525 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 STN1Q9H668 368 aaKnown RBP3.13□□□□□ -1.91
USP8-216ENST00000561206 TMEM160Q9NX00 188 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 PADI1Q9ULC6 663 aa3.13□□□□□ -1.91
USP8-216ENST00000561206 DNAJC16Q9Y2G8 782 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms