RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 AEBP2Q6ZN18 517 aaPredicted RBP32.17■■■□□ 2.74
USP8-216ENST00000561206 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
USP8-216ENST00000561206 SENP3Q9H4L4 574 aaPredicted RBP27.56■■■□□ 2
USP8-216ENST00000561206 PHF23Q9BUL5 403 aaPredicted RBP27.07■■□□□ 1.92
USP8-216ENST00000561206 FOXD1Q16676 465 aa25.72■■□□□ 1.71
USP8-216ENST00000561206 POTEDQ86YR6 584 aa24.78■■□□□ 1.56
USP8-216ENST00000561206 MSH5O43196 834 aa24.34■■□□□ 1.49
USP8-216ENST00000561206 PIAS4Q8N2W9 510 aaPredicted RBP23.84■■□□□ 1.41
USP8-216ENST00000561206 PLPPR3Q6T4P5 718 aa23.7■■□□□ 1.38
USP8-216ENST00000561206 PPP6R1Q9UPN7 881 aa23.58■■□□□ 1.37
USP8-216ENST00000561206 ADRA2BP18089 450 aa23.42■■□□□ 1.34
USP8-216ENST00000561206 DMRT2Q9Y5R5 561 aa21.78■■□□□ 1.08
USP8-216ENST00000561206 MAPK8IP2Q13387 824 aaPredicted RBP21.68■■□□□ 1.06
USP8-216ENST00000561206 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
USP8-216ENST00000561206 CACNB1Q02641 598 aaPredicted RBP21.13■□□□□ 0.97
USP8-216ENST00000561206 HOXD11P31277 338 aaPredicted RBP20.78■□□□□ 0.92
USP8-216ENST00000561206 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
USP8-216ENST00000561206 DCAF8L1A6NGE4 600 aa20.69■□□□□ 0.9
USP8-216ENST00000561206 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
USP8-216ENST00000561206 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
USP8-216ENST00000561206 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
USP8-216ENST00000561206 C1QBPQ07021 282 aaKnown RBP20.4■□□□□ 0.86
USP8-216ENST00000561206 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
USP8-216ENST00000561206 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
USP8-216ENST00000561206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.742e-6■■■■□ 21.2
USP8-216ENST00000561206 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
USP8-216ENST00000561206 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
USP8-216ENST00000561206 POTEHQ6S545 545 aa19.23■□□□□ 0.67
USP8-216ENST00000561206 DSG3P32926 999 aa19.18■□□□□ 0.66
USP8-216ENST00000561206 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
USP8-216ENST00000561206 CAPN15O75808 1086 aa19.04■□□□□ 0.64
USP8-216ENST00000561206 SLC4A2P04920 1241 aa18.72■□□□□ 0.59
USP8-216ENST00000561206 APLP2Q06481 763 aa18.67■□□□□ 0.58
USP8-216ENST00000561206 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
USP8-216ENST00000561206 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
USP8-216ENST00000561206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
USP8-216ENST00000561206 ABCB7O75027 752 aa18.52■□□□□ 0.56
USP8-216ENST00000561206 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
USP8-216ENST00000561206 KCNA4P22459 653 aa18.49■□□□□ 0.55
USP8-216ENST00000561206 SAMD1Q6SPF0 538 aaPredicted RBP18.38■□□□□ 0.53
USP8-216ENST00000561206 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
USP8-216ENST00000561206 CHRDL2Q6WN34 429 aa18.13■□□□□ 0.49
USP8-216ENST00000561206 POLA2Q14181 598 aa18.01■□□□□ 0.47
USP8-216ENST00000561206 MYCNP04198 464 aaPredicted RBP17.98■□□□□ 0.47
USP8-216ENST00000561206 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
USP8-216ENST00000561206 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.44
USP8-216ENST00000561206 ZBTB12Q9Y330 459 aaPredicted RBP17.67■□□□□ 0.42
USP8-216ENST00000561206 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
USP8-216ENST00000561206 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
USP8-216ENST00000561206 PIP4P2Q8N4L2 257 aa17.56■□□□□ 0.4
USP8-216ENST00000561206 FOXD4L1Q9NU39 408 aa17.48■□□□□ 0.39
USP8-216ENST00000561206 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
USP8-216ENST00000561206 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP8-216ENST00000561206 PITPNM1O00562 1244 aa17.39■□□□□ 0.37
USP8-216ENST00000561206 HAX1O00165 279 aa17.33■□□□□ 0.36
USP8-216ENST00000561206 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
USP8-216ENST00000561206 EVX2Q03828 476 aa17.13■□□□□ 0.33
USP8-216ENST00000561206 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
USP8-216ENST00000561206 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
USP8-216ENST00000561206 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
USP8-216ENST00000561206 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
USP8-216ENST00000561206 ZBTB22O15209 634 aa17.01■□□□□ 0.31
USP8-216ENST00000561206 FBLN2P98095 1184 aa16.92■□□□□ 0.3
USP8-216ENST00000561206 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
USP8-216ENST00000561206 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
USP8-216ENST00000561206 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
USP8-216ENST00000561206 SSUH2Q9Y2M2 353 aa16.82■□□□□ 0.28
USP8-216ENST00000561206 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
USP8-216ENST00000561206 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
USP8-216ENST00000561206 GABBR2O75899 941 aa16.72■□□□□ 0.27
USP8-216ENST00000561206 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
USP8-216ENST00000561206 LHX8Q68G74 356 aa16.64■□□□□ 0.25
USP8-216ENST00000561206 CHADLQ6NUI6 762 aa16.54■□□□□ 0.24
USP8-216ENST00000561206 PRR29P0C7W0 189 aa16.48■□□□□ 0.23
USP8-216ENST00000561206 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP8-216ENST00000561206 POTEIP0CG38 1075 aa16.39■□□□□ 0.21
USP8-216ENST00000561206 CLCN6P51797 869 aa16.39■□□□□ 0.21
USP8-216ENST00000561206 PLSCR2Q9NRY7 297 aa16.38■□□□□ 0.21
USP8-216ENST00000561206 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
USP8-216ENST00000561206 FARP1Q9Y4F1 1045 aaPredicted RBP16.32■□□□□ 0.2
USP8-216ENST00000561206 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
USP8-216ENST00000561206 DCBLD2Q96PD2 775 aa16.09■□□□□ 0.17
USP8-216ENST00000561206 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
USP8-216ENST00000561206 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
USP8-216ENST00000561206 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
USP8-216ENST00000561206 GALR2O43603 387 aaPredicted RBP15.91■□□□□ 0.14
USP8-216ENST00000561206 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
USP8-216ENST00000561206 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
USP8-216ENST00000561206 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
USP8-216ENST00000561206 PHF12Q96QT6 1004 aa15.72■□□□□ 0.11
USP8-216ENST00000561206 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
USP8-216ENST00000561206 MNX1P50219 401 aaPredicted RBP15.69■□□□□ 0.1
USP8-216ENST00000561206 POTEMA6NI47 508 aa15.67■□□□□ 0.1
USP8-216ENST00000561206 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
USP8-216ENST00000561206 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP8-216ENST00000561206 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
USP8-216ENST00000561206 ASTLQ6HA08 431 aaPredicted RBP15.62■□□□□ 0.09
USP8-216ENST00000561206 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
USP8-216ENST00000561206 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
USP8-216ENST00000561206 C7P10643 843 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms