RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 LMO1P25800 156 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 NMT1P30419 496 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 LRPAP1P30533 357 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ABCD1P33897 745 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 GNALP38405 381 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TNFSF9P41273 254 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MATR3P43243 847 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 AARSP49588 968 aaKnown RBP eCLIP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 LIG4P49917 911 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ITGA8P53708 1063 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 PRKAG1P54619 331 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 NTHL1P78549 312 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SATB1Q01826 763 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CEBPZQ03701 1054 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SPAG1Q07617 926 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MYO1EQ12965 1108 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 HTR4Q13639 388 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 PTPRRQ15256 657 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 KYAT1Q16773 422 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ERCC6LQ2NKX8 1250 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MGAT5BQ3V5L5 792 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ZC2HC1CQ53FD0 456 aaPredicted RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 PPM1LQ5SGD2 360 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 DEPDC1Q5TB30 811 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 LIN9Q5TKA1 542 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 RRAGBQ5VZM2 374 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 RESP18Q5W5W9 173 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 KIAA0895LQ68EN5 471 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC39A4Q6P5W5 647 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CCDC73Q6ZRK6 1079 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 RTL10Q7L3V2 364 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 GET4Q7L5D6 327 aaPredicted RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ZNF720Q7Z2F6 126 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MAVSQ7Z434 540 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 KCTD20Q7Z5Y7 419 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 GRASPQ7Z6J2 395 aaPredicted RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SLC15A3Q8IY34 581 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TMEM105Q8N8V8 129 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 IQUBQ8NA54 791 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 RASSF8Q8NHQ8 419 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 BPIFB1Q8TDL5 484 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TMEM171Q8WVE6 324 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 DNAJC19Q96DA6 116 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 BICD1Q96G01 975 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TSPAN18Q96SJ8 248 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 NELL2Q99435 816 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 MSTO1Q9BUK6 570 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 RPP25Q9BUL9 199 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 STRA6Q9BX79 667 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 PANK2Q9BZ23 570 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CUEDC2Q9H467 287 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ST6GALNAC4Q9H4F1 302 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ZHX3Q9H4I2 956 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CXorf36Q9H7Y0 433 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 SYNPO2LQ9H987 977 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 KLC4Q9NSK0 619 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 HCFC1R1Q9NWW0 138 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ZSCAN32Q9NX65 697 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 FOXJ2Q9P0K8 574 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 DNMT3BQ9UBC3 853 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 WNT16Q9UBV4 365 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TUBGCP4Q9UGJ1 667 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 FBXL5Q9UKA1 691 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CPSF3Q9UKF6 684 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ITGB1BP2Q9UKP3 347 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 UBQLN1Q9UMX0 589 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 HPSEQ9Y251 543 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 STYXL1Q9Y6J8 313 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 ZFP37Q9Y6Q3 630 aaPredicted RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 TDRD15B5MCY1 1934 aaKnown RBP3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 CITO14578 2027 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 DENND4AQ7Z401 1863 aa3.73□□□□□ -1.81
UBE2D3-226ENST00000508635 WDR27A2RRH5 827 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 LINC00473A8K010 186 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 RHPN2P1A8MT19 583 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 TISP43B9A030 160 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 F8W8V4 182 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 H7C4K7 107 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PIRO00625 290 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PRRG1O14668 218 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 OGTO15294 1046 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 POLR2DO15514 142 aaKnown RBP3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PI15O43692 258 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PPFIA2O75334 1257 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 SEC24AO95486 1093 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 LMNAP02545 664 aaKnown RBP3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 OR4Q2P0C623 313 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 ZFXP17010 805 aaPredicted RBP3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 GAP43P17677 238 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PTPN2P17706 415 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 AOC1P19801 751 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 ADSSP30520 456 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 LIPAP38571 399 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 GRIA3P42263 894 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 PIK3CBP42338 1070 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 ME1P48163 572 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 ACOT2P49753 483 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 CLCN5P51795 746 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 CASP5P51878 434 aa3.72□□□□□ -1.81
UBE2D3-226ENST00000508635 DGKEP52429 567 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms