RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 KCNK16Q96T55 309 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TCHPQ9BT92 498 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ISCUQ9H1K1 167 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 SLC6A17Q9H1V8 727 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 PLEKHA4Q9H4M7 779 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TUFT1Q9NNX1 390 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DNAJC17Q9NVM6 304 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 PAG1Q9NWQ8 432 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 ERAP1Q9NZ08 941 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TRPC4Q9UBN4 977 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 DDX25Q9UHL0 483 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 FBXW11Q9UKB1 542 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 REXO2Q9Y3B8 237 aaKnown RBP6.17□□□□□ -1.42
BRCA1-224ENST00000497488 TEX264Q9Y6I9 313 aa6.17□□□□□ -1.42
BRCA1-224ENST00000497488 FAM237AA0A1B0GTK4 181 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 PMS2P1A4D2B8 440 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CCDC169A6NNP5 214 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 KPNA7A9QM74 516 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 PSMD9O00233 223 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 IKBKBO14920 756 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 TRIAP1O43715 76 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 TSC22D2O75157 780 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MMP2P08253 660 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 IL7RP16871 459 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 HOXB9P17482 250 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 EDN2P20800 178 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 TACR2P21452 398 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 GPTP24298 496 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 IL4RP24394 825 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ITGB7P26010 798 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CRKLP46109 303 aaKnown RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 KCNJ1P48048 391 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 NCKAP1LP55160 1127 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 TFAP4Q01664 338 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 IFT88Q13099 833 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 TMED1Q13445 227 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 RIN1Q13671 783 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 HLXQ14774 488 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 NAB2Q15742 525 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 HIST2H2ACQ16777 129 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 RSPO4Q2I0M5 234 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 EDRF1Q3B7T1 1238 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 FUT11Q495W5 492 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 SOWAHCQ53LP3 525 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 NKAPLQ5M9Q1 402 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MOXD1Q6UVY6 613 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 GLB1LQ6UWU2 654 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MFSD7Q6UXD7 560 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 SEPT14Q6ZU15 432 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CLNKQ7Z7G1 428 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 NEK8Q86SG6 692 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MFN1Q8IWA4 741 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ADGRG5Q8IZF4 528 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CLYBLQ8N0X4 340 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 SRFBP1Q8NEF9 429 aaKnown RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 FLAD1Q8NFF5 587 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 OR52K2Q8NGK3 314 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 URGCPQ8TCY9 931 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 FAM136AQ96C01 138 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CTHRC1Q96CG8 243 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ALG14Q96F25 216 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 HES6Q96HZ4 224 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CPPED1Q9BRF8 314 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MMP27Q9H306 513 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ANKZF1Q9H8Y5 726 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CNOT10Q9H9A5 744 aaKnown RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 VPS37BQ9H9H4 285 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 L2HGDHQ9H9P8 463 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 PIH1D3Q9NQM4 214 aaKnown RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 STX8Q9UNK0 236 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 CTNND2Q9UQB3 1225 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ZNF148Q9UQR1 794 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 AAR2Q9Y312 384 aaKnown RBP6.16□□□□□ -1.42
BRCA1-224ENST00000497488 ZDHHC9Q9Y397 364 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 PKP3Q9Y446 797 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 RICTORQ6R327 1708 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 MYO5CQ9NQX4 1742 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 VPS8Q8N3P4 1428 aa6.16□□□□□ -1.42
BRCA1-224ENST00000497488 DENND4BO75064 1496 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ADGRL1O94910 1474 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ARHGAP5Q13017 1502 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 CFAP74Q9C0B2 1584 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 PREX2Q70Z35 1606 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 MAGEB17A8MXT2 336 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 GPR89AB7ZAQ6 455 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 BOLA2-SMG1P6H3BVE0 249 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
BRCA1-224ENST00000497488 STRNO43815 780 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 TFP02787 698 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 GPR89BP0CG08 455 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ACTN1P12814 892 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ARF4P18085 180 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-224ENST00000497488 EPORP19235 508 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 MAGEA4P43358 317 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ARCN1P48444 511 aaKnown RBP6.15□□□□□ -1.42
BRCA1-224ENST00000497488 OAZ1P54368 228 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 PDE1AP54750 535 aa6.15□□□□□ -1.42
BRCA1-224ENST00000497488 ECT2LQ008S8 904 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms