RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 ITGA4P13612 1032 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 PSMA1P25786 263 aaKnown RBP8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 LHX1P48742 406 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 INAVAQ3KP66 663 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 TDRD10Q5VZ19 366 aaKnown RBP8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 OR4M2Q8NGB6 313 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 GPR101Q96P66 508 aaPredicted RBP8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 HIST1H2AAQ96QV6 131 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 CDRT15Q96T59 188 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 PCDHB12Q9Y5F1 795 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 ANKRD36CQ5JPF3 1778 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 SH3D21A4FU49 640 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 BTN3A3O00478 584 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 PLD2O14939 933 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 CHST10O43529 356 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 IFNA6P05013 189 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 THOP1P52888 689 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 ELAVL2Q12926 359 aaKnown RBP8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 ZFP69Q49AA0 526 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 CCNYL2Q5T2Q4 361 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 ATF7IP2Q5U623 682 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 NIPAL1Q6NVV3 410 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 CPA5Q8WXQ8 436 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 TTLL2Q9BWV7 592 aa8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.42□□□□□ -1.06
CACNA1D-201ENST00000288139 DCXO43602 365 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 BMP6P22004 513 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RGS6P49758 472 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SELENOVP59797 346 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RASGEF1BQ0VAM2 473 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 MOGQ16653 247 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PUS10Q3MIT2 529 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 LYPLAL1Q5VWZ2 237 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 MMP19Q99542 508 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 MYO5AQ9Y4I1 1855 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 IPO13O94829 963 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SCELO95171 688 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 AOC1P19801 751 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 FGFR2P21802 821 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SLC7A1P30825 629 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PSEN1P49768 467 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PER3P56645 1201 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 CRY1Q16526 586 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PLEKHG6Q3KR16 790 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 C6orf89Q6UWU4 347 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SLC4A11Q8NBS3 891 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RERGQ96A58 199 aaPredicted RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PANX3Q96QZ0 392 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 FAM49BQ9NUQ9 324 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 MDM4O15151 490 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 DFNA5O60443 496 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 NDUFB10O96000 172 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ITGA2BP08514 1039 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 S100A7P31151 101 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RAB27AP51159 221 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PRKCEQ02156 737 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ZNF33AQ06730 810 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 FAPQ12884 760 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 COQ5Q5HYK3 327 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 HGSNATQ68CP4 663 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 HERC6Q8IVU3 1022 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RGL4Q8IZJ4 473 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 LPCAT1Q8NF37 534 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 HDAC2Q92769 488 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ZNF354BQ96LW1 612 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 YME1L1Q96TA2 773 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 C6orf62Q9GZU0 229 aaPredicted RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 CMTM6Q9NX76 183 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 STOMP27105 288 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RBM44Q6ZP01 1051 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RNF180Q86T96 592 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 LENG9Q96B70 501 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 TXN2Q99757 166 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 BHLHE41Q9C0J9 482 aaPredicted RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 CLPBQ9H078 707 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 N6AMT1Q9Y5N5 214 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 TAF6P49848 677 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 PTSQ03393 145 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SRFBP1Q8NEF9 429 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 BRINP2Q9C0B6 783 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ELOVL6Q9H5J4 265 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SPATA7Q9P0W8 599 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ORC5O43913 435 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 TFRCP02786 760 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 SDC2P34741 201 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 OMPP47874 163 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 POLR2LP62875 67 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 RPP38P78345 283 aaKnown RBP8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 MAMLD1Q13495 774 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 ATP1A4Q13733 1029 aa8.41□□□□□ -1.06
CACNA1D-201ENST00000288139 AFTPHQ6ULP2 937 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms